Multifunctional DNA conjugates for the in vitro selection of new catalysts

被引:13
作者
Hausch, Felix [1 ]
Jaeschke, Andres [1 ]
机构
[1] Free Univ Berlin, Fachbereich Biol Chem & Pharm, Inst Chem, D-14195 Berlin, Germany
关键词
D O I
10.1093/nar/28.8.e35
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
DNA-substrate conjugates are required for the direct in vitro selection of novel DNA catalysts for reactions between two small reactants. Here we describe the introduction of all necessary features into ssDNA by a novel, multifunctional primer containing a flexible PEG spacer, an o-nitrobenzyl moiety allowing for selective photocleavage, and anthracene as a reactant, a fluorescence label and/or an immobilization tag. These components were checked individually and by a mock selection.
引用
收藏
页数:3
相关论文
共 14 条
[1]  
Andreadis J D, 2000, Nucleic Acids Res, V28, pe5, DOI 10.1093/nar/28.2.e5
[2]   In vitro selection of catalytic polynucleotides [J].
Breaker, RR .
CHEMICAL REVIEWS, 1997, 97 (02) :371-390
[3]   SELECTION INVITRO OF SINGLE-STRANDED-DNA MOLECULES THAT FOLD INTO SPECIFIC LIGAND-BINDING STRUCTURES [J].
ELLINGTON, AD ;
SZOSTAK, JW .
NATURE, 1992, 355 (6363) :850-852
[4]   Libraries of multifunctional RNA conjugates for the selection of new RNA catalysts [J].
Hausch, F ;
Jaschke, A .
BIOCONJUGATE CHEMISTRY, 1997, 8 (06) :885-890
[5]   DNA sequence analysis by MALDI mass spectrometry [J].
Kirpekar, F ;
Nordhoff, E ;
Larsen, LK ;
Kristiansen, K ;
Roepstorff, P ;
Hillenkamp, F .
NUCLEIC ACIDS RESEARCH, 1998, 26 (11) :2554-2559
[6]   Phosphorylating DNA with DNA [J].
Li, YF ;
Breaker, RR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (06) :2746-2751
[7]   DESIGN AND SYNTHESIS OF A VERSATILE PHOTOCLEAVABLE DNA BUILDING-BLOCK - APPLICATION TO PHOTOTRIGGERED HYBRIDIZATION [J].
ORDOUKHANIAN, P ;
TAYLOR, JS .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (37) :9570-9571
[8]   Site-specific modification of enzymatically synthesized RNA: Transcription initiation and Diels-Alder reaction [J].
Seelig, B ;
Jaschke, A .
TETRAHEDRON LETTERS, 1997, 38 (44) :7729-7732
[9]   A small catalytic RNA motif with Diels-Alderase activity [J].
Seelig, B ;
Jäschke, A .
CHEMISTRY & BIOLOGY, 1999, 6 (03) :167-176
[10]   DNA enzymes [J].
Sen, D ;
Geyer, CR .
CURRENT OPINION IN CHEMICAL BIOLOGY, 1998, 2 (06) :680-687