Molecular simulations of the large conductance mechanosensitive (MscL) channel under mechanical loading

被引:21
作者
Bilston, LE [1 ]
Mylvaganam, K [1 ]
机构
[1] Univ Sydney, Sibley Sch Mech & Aerosp Engn, Sydney, NSW 2006, Australia
关键词
molecular dynamics; mechanotransduction; ion channel; membrane tension;
D O I
10.1016/S0014-5793(02)02254-8
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The MscL channel is a mechanosensitive channel which is gated by membrane stress or tension. Here, we describe a series of simulations which apply simulated mechanical stress to a molecular model of the MscL channel using two methods direct force application to the transmembrane segments, and anisotropic pressure coupling. In the latter simulations, pressures less than that equivalent to a bilayer tension of 12 dyn/cm did not cause the channel to open, while pressures in excess of this value resulted in the channel opening. These results are in approximate agreement with experimental findings. (C) 2002 Published by Elsevier Science B.V. on behalf of the Federation of European Biochemical Societies.
引用
收藏
页码:185 / 190
页数:6
相关论文
共 13 条
[1]   Contributions of the different extramembranous domains of the mechanosensitive ion channel MscL to its response to membrane tension [J].
Ajouz, B ;
Berrier, C ;
Besnard, M ;
Martinac, B ;
Ghazi, A .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (02) :1015-1022
[2]   Channel gate! Tension, leak and disclosure [J].
Batiza, AF ;
Rayment, I ;
Kung, C .
STRUCTURE, 1999, 7 (05) :R99-R103
[3]   GROMACS - A MESSAGE-PASSING PARALLEL MOLECULAR-DYNAMICS IMPLEMENTATION [J].
BERENDSEN, HJC ;
VANDERSPOEL, D ;
VANDRUNEN, R .
COMPUTER PHYSICS COMMUNICATIONS, 1995, 91 (1-3) :43-56
[4]   MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH [J].
BERENDSEN, HJC ;
POSTMA, JPM ;
VANGUNSTEREN, WF ;
DINOLA, A ;
HAAK, JR .
JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) :3684-3690
[5]   Bacterial mechanosensitive channels: integrating physiology, structure and function [J].
Blount, P ;
Moe, PC .
TRENDS IN MICROBIOLOGY, 1999, 7 (10) :420-424
[6]   Structural determinants of MscL gating studied by molecular dynamics simulations [J].
Gullingsrud, J ;
Kosztin, D ;
Schulten, K .
BIOPHYSICAL JOURNAL, 2001, 80 (05) :2074-2081
[7]   MOLMOL: A program for display and analysis of macromolecular structures [J].
Koradi, R ;
Billeter, M ;
Wuthrich, K .
JOURNAL OF MOLECULAR GRAPHICS, 1996, 14 (01) :51-&
[8]   NUMERICAL-INTEGRATION OF CARTESIAN EQUATIONS OF MOTION OF A SYSTEM WITH CONSTRAINTS - MOLECULAR-DYNAMICS OF N-ALKANES [J].
RYCKAERT, JP ;
CICCOTTI, G ;
BERENDSEN, HJC .
JOURNAL OF COMPUTATIONAL PHYSICS, 1977, 23 (03) :327-341
[9]   A novel method for structure-based prediction of ion channel conductance properties [J].
Smart, OS ;
Breed, J ;
Smith, GR ;
Sansom, MSP .
BIOPHYSICAL JOURNAL, 1997, 72 (03) :1109-1126
[10]   HOLE: A program for the analysis of the pore dimensions of ion channel structural models [J].
Smart, OS ;
Neduvelil, JG ;
Wang, X ;
Wallace, BA ;
Sansom, MSP .
JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 1996, 14 (06) :354-&