A limiting speed for protein folding at low solvent viscosity

被引:69
作者
Qiu, LL [1 ]
Hagen, SJ [1 ]
机构
[1] Univ Florida, Dept Phys, Gainesville, FL 32611 USA
关键词
D O I
10.1021/ja049966r
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Because protein folding dynamics are heavily overdamped, Kramers theory predicts the rate of folding to scale inversely with the reaction friction, which is usually interpreted to mean the solvent viscosity. This does not mean, however, that the speed of folding can increase without limit as solvent viscosity decreases. We show that, in a sufficiently fast-folding protein, the folding speed approaches a finite limit at low solvent viscosity, indicating a reaction controlled by internal friction. Copyright © 2004 American Chemical Society.
引用
收藏
页码:3398 / 3399
页数:2
相关论文
共 18 条
  • [1] The speed limit for protein folding measured by triplet-triplet energy transfer
    Bieri, O
    Wirz, J
    Hellrung, B
    Schutkowski, M
    Drewello, M
    Kiefhaber, T
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (17) : 9597 - 9601
  • [2] The protein-folding speed limit:: Intrachain diffusion times set by electron-transfer rates in denatured Ru(NH3)5(His-33)-Zn-cytochrome c
    Chang, IJ
    Lee, JC
    Winkler, JR
    Gray, HB
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (07) : 3838 - 3840
  • [3] De Gennes PG., 1979, SCALING CONCEPTS POL
  • [4] Rate of intrachain diffusion of unfolded cytochrome c
    Hagen, SJ
    Hofrichter, J
    Eaton, WA
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 1997, 101 (13): : 2352 - 2365
  • [5] Diffusion-limited contact formation in unfolded cytochrome c: Estimating the maximum rate of protein folding
    Hagen, SJ
    Hofrichter, J
    Szabo, A
    Eaton, WA
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (21) : 11615 - 11617
  • [6] HANGGI P, 1990, REV MOD PHYS, V62, P251, DOI 10.1103/RevModPhys.62.251
  • [7] Diffusion control in an elementary protein folding reaction
    Jacob, M
    Schindler, T
    Balbach, J
    Schmid, FX
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (11) : 5622 - 5627
  • [8] Jacob M, 1999, NAT STRUCT BIOL, V6, P923
  • [9] Protein folding as a diffusional process
    Jacob, M
    Schmid, FX
    [J]. BIOCHEMISTRY, 1999, 38 (42) : 13773 - 13779
  • [10] Effect of viscosity on the kinetics of α-helix and β-hairpin formation
    Jas, GS
    Eaton, WA
    Hofrichter, J
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2001, 105 (01): : 261 - 272