Sulfate reducing bacteria in microbial mats: Changing paradigms, new discoveries

被引:305
作者
Baumgartner, LK
Reid, RP
Dupraz, C
Decho, AW
Buckley, DH
Spear, JR
Przekop, KM
Visscher, PT
机构
[1] Univ Connecticut, Dept Marine Sci, Groton, CT 06340 USA
[2] Univ Miami, Rosenstiel Sch Marine & Atmospher Sci, Miami, FL 33149 USA
[3] Univ Neuchatel, Inst Geol, CH-2007 Neuchatel, Switzerland
[4] Univ S Carolina, Arnold Sch Publ Hlth, Dept Environm Hlth Sci, Columbia, SC 29208 USA
[5] Cornell Univ, Dept Crop & Soil Sci, Ithaca, NY 14853 USA
[6] Univ Colorado, Boulder, CO 80309 USA
基金
美国国家科学基金会;
关键词
sulfate-reducing bacteria; biofilms; carbonate precipitation; lithification; stromatolites; microbial mats;
D O I
10.1016/j.sedgeo.2005.12.008
中图分类号
P5 [地质学];
学科分类号
0709 ; 081803 ;
摘要
Sulfate reducing bacteria (SRB) have existed throughout much of Earth's history and remain major contributors to carbon cycling in modem systems. Despite their importance, misconceptions about SRB are prevalent. In particular, SRB are commonly thought to lack oxygen tolerance and to exist only in anoxic environments. Through the last two decades, researchers have discovered that SRB can, in fact, tolerate and even respire oxygen. Investigations of microbial mat systems have demonstrated that SRB are both abundant and active in the oxic zones of mats. Additionally, SRB have been found to be highly active in the lithified zones of microbial mats, suggesting a connection between sulfate reduction and mat lithification. In the present paper, we review recent research on SRB distribution and present new preliminary findings on both die diversity and distribution of delta-proteobacterial SRB in lithifying and non-lithifying microbial mat systems. These preliminary findings indicate the unexplored diversity of SRB in a microbial mat system and demonstrate the close microspatial association of SRB and cyanobacteria in the oxic zone of the mat. Possible mechanisms and further studies to elucidate mechanisms for carbonate precipitation via sulfate reduction are also discussed. (c) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:131 / 145
页数:15
相关论文
共 82 条
[11]   BIOGEOCHEMICAL CYCLES OF CARBON, SULFUR, AND FREE OXYGEN IN A MICROBIAL MAT [J].
CANFIELD, DE ;
MARAIS, DJD .
GEOCHIMICA ET COSMOCHIMICA ACTA, 1993, 57 (16) :3971-3984
[12]   AEROBIC SULFATE REDUCTION IN MICROBIAL MATS [J].
CANFIELD, DE ;
DESMARAIS, DJ .
SCIENCE, 1991, 251 (5000) :1471-1473
[13]   PATHWAYS OF ORGANIC-CARBON OXIDATION IN 3 CONTINENTAL-MARGIN SEDIMENTS [J].
CANFIELD, DE ;
JORGENSEN, BB ;
FOSSING, H ;
GLUD, R ;
GUNDERSEN, J ;
RAMSING, NB ;
THAMDRUP, B ;
HANSEN, JW ;
NIELSEN, LP ;
HALL, POJ .
MARINE GEOLOGY, 1993, 113 (1-2) :27-40
[14]   RUBREDOXIN OXIDASE, A NEW FLAVO-HEMO-PROTEIN, IS THE SITE OF OXYGEN REDUCTION TO WATER BY THE STRICT ANAEROBE DESULFOVIBRIO-GIGAS [J].
CHEN, L ;
LIU, MY ;
LEGALL, J ;
FARELEIRA, P ;
SANTOS, H ;
XAVIER, AV .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1993, 193 (01) :100-105
[15]   Oxygen respiration by Desulfovibrio species [J].
Cypionka, H .
ANNUAL REVIEW OF MICROBIOLOGY, 2000, 54 :827-848
[16]   SURVIVAL OF SULFATE-REDUCING BACTERIA AFTER OXYGEN STRESS, AND GROWTH IN SULFATE-FREE OXYGEN-SULFIDE GRADIENTS [J].
CYPIONKA, H ;
WIDDEL, F ;
PFENNING, N .
FEMS MICROBIOLOGY ECOLOGY, 1985, 31 (01) :39-45
[17]   OXIDATION OF H-2, ORGANIC-COMPOUNDS AND INORGANIC SULFUR-COMPOUNDS COUPLED TO REDUCTION OF O-2 OR NITRATE BY SULFATE-REDUCING BACTERIA [J].
DANNENBERG, S ;
KRODER, M ;
DILLING, W ;
CYPIONKA, H .
ARCHIVES OF MICROBIOLOGY, 1992, 158 (02) :93-99
[18]   Production and cycling of natural microbial exopolymers (EPS) within a marine stromatolite [J].
Decho, AW ;
Visscher, PT ;
Reid, RP .
PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY, 2005, 219 (1-2) :71-86
[19]  
Defarge C, 1996, J SEDIMENT RES, V66, P935
[20]   NATURAL RELATIONSHIPS AMONG SULFATE-REDUCING EUBACTERIA [J].
DEVEREUX, R ;
DELANEY, M ;
WIDDEL, F ;
STAHL, DA .
JOURNAL OF BACTERIOLOGY, 1989, 171 (12) :6689-6695