Crowding effects on diffusion in solutions and cells

被引:509
作者
Dix, James A. [1 ]
Verkman, A. S. [2 ,3 ]
机构
[1] SUNY Binghamton, Dept Chem, Binghamton, NY 13902 USA
[2] Univ Calif San Francisco, Dept Med, San Francisco, CA 94143 USA
[3] Univ Calif San Francisco, Dept Physiol, San Francisco, CA 94143 USA
关键词
Brownian diffusion; anomalous diffusion; molecular crowding; cell membrane; cytoplasm;
D O I
10.1146/annurev.biophys.37.032807.125824
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
We review the effects of molecular crowding on solute diffusion in solution and in cellular aqueous compartments and membranes. Anomalous diffusion, in which mean squared displacement does not increase linearly with time, is predicted in simulations of solute diffusion in media crowded with fixed or mobile obstacles, or when solute diffusion is restricted or accelerated by a variety of geometric or active transport processes. Experimental measurements of solute diffusion in solutions and cellular aqueous compartments, however, generally show Brownian diffusion. In cell membranes, there are examples of both Brownian and anomalous diffusion, with the latter likely produced by lipid-protein and protein-protein interactions. We conclude that the notion of universally anomalous diffusion in cells as a consequence of molecular crowding is not correct and that slowing of diffusion in cells is less marked than has been generally assumed.
引用
收藏
页码:247 / 263
页数:17
相关论文
共 56 条
[1]   Stochastic simulation of chemical reactions with spatial resolution and single molecule detail [J].
Andrews, SS ;
Bray, D .
PHYSICAL BIOLOGY, 2004, 1 (03) :137-151
[2]  
[Anonymous], MASS TRANSFER FUNDAM
[3]   Fluorescence cross-correlation spectroscopy in living cells [J].
Bacia, K ;
Kim, SA ;
Schwille, P .
NATURE METHODS, 2006, 3 (02) :83-89
[4]  
Berne BJ, 2000, DYNAMIC LIGHT SCATTE
[5]   ANOMALOUS DIFFUSION IN DISORDERED MEDIA - STATISTICAL MECHANISMS, MODELS AND PHYSICAL APPLICATIONS [J].
BOUCHAUD, JP ;
GEORGES, A .
PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS, 1990, 195 (4-5) :127-293
[6]   Long-range nonanomalous diffusion of quantum dot-labeled aquaporin-1 water channels in the cell plasma membrane [J].
Crane, Jonathan M. ;
Verkman, A. S. .
BIOPHYSICAL JOURNAL, 2008, 94 (02) :702-713
[7]  
Crank J., 1975, The Mathematics of Diffusion, V1
[8]   Actin cytoskeleton as the principal determinant of size-dependent DNA mobility in cytoplasm [J].
Dauty, E ;
Verkman, AS .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (09) :7823-7828
[9]   Molecular crowding reduces to a similar extent the diffusion of small solutes and macromolecules: measurement by fluorescence correlation spectroscopy [J].
Dauty, E ;
Verkman, AS .
JOURNAL OF MOLECULAR RECOGNITION, 2004, 17 (05) :441-447
[10]   Diffusion of green fluorescent protein in the aqueous-phase lumen of endoplasmic reticulum [J].
Dayel, MJ ;
Hom, EFY ;
Verkman, AS .
BIOPHYSICAL JOURNAL, 1999, 76 (05) :2843-2851