The electronic structure of the catalytic intermediate Ni-C in [NiFe] and [NiFeSe] hydrogenases

被引:49
作者
Stein, M [1 ]
Lubitz, W [1 ]
机构
[1] Tech Univ Berlin, Inst Chem, Max Volmer Lab Biophys Chem, D-10623 Berlin, Germany
关键词
D O I
10.1039/b105723p
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The catalytic intermediate Ni-C in the heterolytic cleavage of molecular hydrogen is studied using relativistic DFT calculations. The difference between the [NiFe] and [NiFeSe] hydrogenases is investigated and it is found that structural modifications lead to changes in the electronic structure, manifested by g-values and hyperfine interactions. The sulfur to selenium substitution leads to small changes in the structural parameters and the spin density distribution. The g-tensor principal values are changed but the g-tensor orientation is retained in both enzymes. The hyperfine parameters show small but systematic changes. Participation of the terminal cysteine Cys530 in the reaction mechanism is discussed.
引用
收藏
页码:5115 / 5120
页数:6
相关论文
共 53 条
[1]   THE STRUCTURE AND MECHANISM OF IRON-HYDROGENASES [J].
ADAMS, MWW .
BIOCHIMICA ET BIOPHYSICA ACTA, 1990, 1020 (02) :115-145
[2]   NICKEL HYDROGENASES - IN SEARCH OF THE ACTIVE-SITE [J].
ALBRACHT, SPJ .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 1994, 1188 (03) :167-204
[3]   A hybrid density functional theory molecular mechanics study of nickel-iron hydrogenase: Investigation of the active site redox states [J].
Amara, P ;
Volbeda, A ;
Fontecilla-Camps, JC ;
Field, MJ .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (18) :4468-4477
[4]   DENSITY FUNCTIONAL CALCULATIONS OF MOLECULAR-BOND ENERGIES [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1986, 84 (08) :4524-4529
[5]   DENSITY-FUNCTIONAL EXCHANGE-ENERGY APPROXIMATION WITH CORRECT ASYMPTOTIC-BEHAVIOR [J].
BECKE, AD .
PHYSICAL REVIEW A, 1988, 38 (06) :3098-3100
[6]   Ni-Fe hydrogenases: A density functional theory study of active site models [J].
De Gioia, L ;
Fantucci, P ;
Guigliarelli, B ;
Bertrand, P .
INORGANIC CHEMISTRY, 1999, 38 (11) :2658-2662
[7]  
De Gioia L, 1999, INT J QUANTUM CHEM, V73, P187, DOI 10.1002/(SICI)1097-461X(1999)73:2<187::AID-QUA12>3.0.CO
[8]  
2-X
[9]   Infrared spectroelectrochemical characterization of the [NiFe] hydrogenase of Desulfovibrio gigas [J].
deLacey, AL ;
Hatchikian, EC ;
Volbeda, A ;
Frey, M ;
FontecillaCamps, JC ;
Fernandez, VM .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (31) :7181-7189
[10]  
EIDNESS MK, 1989, P NATL ACAD SCI USA, V86, P147