Complete genome sequence of Kangiella koreensis type strain (SW-125T)

被引：13

作者：

Han, Cliff ^{[2
,3
]}

Sikorski, Johannes ^{[1
]}

Lapidus, Alla ^{[2
]}

Nolan, Matt ^{[2
]}

Del Rio, Tijana Glavina ^{[2
]}

Tice, Hope ^{[2
]}

Cheng, Jan-Fang ^{[2
]}

Lucas, Susan ^{[2
]}

Chen, Feng ^{[2
]}

Copeland, Alex ^{[2
]}

Ivanova, Natalia ^{[2
]}

Mavromatis, Konstantinos ^{[2
]}

Ovchinnikova, Galina ^{[2
]}

Pati, Amrita ^{[2
]}

Bruce, David ^{[2
,3
]}

Goodwin, Lynne ^{[2
,3
]}

Pitluck, Sam ^{[2
]}

Chen, Amy ^{[4
]}

Palaniappan, Krishna ^{[4
]}

Land, Miriam ^{[2
,5
]}

Hauser, Loren ^{[2
,5
]}

Chang, Yun-Juan ^{[2
,5
]}

Jeffries, Cynthia D. ^{[2
,5
]}

Chain, Patrick ^{[2
,6
]}

Saunders, Elizabeth ^{[2
,3
]}

Brettin, Thomas ^{[2
,3
]}

Goeker, Markus ^{[1
]}

Tindall, Brian J. ^{[1
]}

Bristow, Jim ^{[2
]}

Eisen, Jonathan A. ^{[2
,7
]}

Markowitz, Victor ^{[4
]}

Hugenholtz, Philip ^{[2
]}

Kyrpides, Nikos C. ^{[2
]}

Klenk, Hans-Peter ^{[1
]}

Detter, John C. ^{[2
,3
]}

机构：

[1] DSMZ German Collect Microorganisms & Cell Culture, Braunschweig, Germany

[2] US DOE, Joint Genome Inst, Walnut Creek, CA USA

[3] Los Alamos Natl Lab, Los Alamos, NM USA

[4] Univ Calif Berkeley, Lawrence Berkeley Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA

[5] Oak Ridge Natl Lab, Oak Ridge, TN USA

[6] Lawrence Livermore Natl Lab, Livermore, CA USA

[7] Univ Calif Davis, Genome Ctr, Davis, CA 95616 USA

来源：

STANDARDS IN GENOMIC SCIENCES | 2009年 / 1卷 / 03期

关键词：

mesophile; non-pathogenic; aerobic and anaerobic growth; Oceanospirillales;

D O I：

10.4056/sigs.36635

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Kangiella koreensis (Yoon et al. 2004) is the type species of the genus and is of phylogenetic interest because of the very isolated location of the genus Kangiella in the gammaproteobacterial order Oceanospirillales. K. koreensis SW-125(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from tidal flat sediments at Daepo Beach, Yellow Sea, Korea. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the genus Kangiella and only the fourth genome from the order Oceanospirillales. This 2,852,073 bp long single replicon genome with its 2647 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

引用

页码：226 / 233

页数：8

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