Assessing fracture risk using gradient boosting machine (GBM) models

被引:44
作者
Atkinson, Elizabeth J. [1 ]
Therneau, Terry M.
Melton, L. Joseph, III [2 ,3 ,4 ,5 ]
Camp, Jon J.
Achenbach, Sara J.
Amin, Shreyasee [2 ,6 ]
Khosla, Sundeep [3 ,4 ,5 ]
机构
[1] Mayo Clin, Dept Hlth Sci Res, Div Biomed Stat & Informat, Coll Med, Rochester, MN 55905 USA
[2] Mayo Clin, Dept Hlth Sci Res, Div Epidemiol, Coll Med, Rochester, MN 55905 USA
[3] Mayo Clin, Coll Med, Div Endocrinol, Rochester, MN 55905 USA
[4] Mayo Clin, Coll Med, Div Metab, Rochester, MN 55905 USA
[5] Mayo Clin, Coll Med, Div Nutr, Rochester, MN 55905 USA
[6] Mayo Clin, Coll Med, Dept Internal Med, Div Rheumatol, Rochester, MN 55905 USA
基金
美国国家卫生研究院;
关键词
BONE DENSITY; BONE QUALITY; QCT; VERTEBRAL FRACTURE; DISTAL FOREARM FRACTURE; GRADIENT BOOSTING; QUANTITATIVE COMPUTED-TOMOGRAPHY; IN-VIVO ASSESSMENT; BONE-STRUCTURE; DISTAL RADIUS; POSTMENOPAUSAL WOMEN; VERTEBRAL FRACTURES; HR-PQCT; RESOLUTION; ARCHITECTURE; ACCURACY;
D O I
10.1002/jbmr.1577
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Advanced bone imaging with quantitative computed tomography (QCT) has had limited success in significantly improving fracture prediction beyond standard areal bone mineral density (aBMD) measurements. Thus, we examined whether a machine learning paradigm, gradient boosting machine (GBM) modeling, which can incorporate diverse measurements of bone density and geometry from central QCT imaging and of bone microstructure from high-resolution peripheral QCT imaging, can improve fracture prediction. We studied two cohorts of postmenopausal women: 105 with and 99 without distal forearm fractures (Distal Forearm Cohort) and 40 with at least one grade 2 or 3 vertebral deformity and 78 with no vertebral fracture (Vertebral Cohort). Within each cohort, individual bone density, structure, or strength variables had areas under receiver operating characteristic curves (AUCs) ranging from 0.50 to 0.84 (median 0.61) for discriminating women with and without fracture. Using all possible variables in the GBM model, the AUCs were close to 1.0. Fracture predictions in the Vertebral Cohort using the GBM models built with the Distal Forearm Cohort had AUCs of 0.820.95, whereas predictions in the Distal Forearm Cohort using models built with the Vertebral Cohort had AUCs of 0.800.83. Attempts at capturing a comparable parametric model using the top variables from the Distal Forearm Cohort resulted in resulted in an AUC of 0.81. Relatively high AUCs for differing fracture types suggest that an underlying fracture propensity is being captured by this modeling approach. More complex modeling, such as with GBM, creates stronger fracture predictions and may allow deeper insights into information provided by advanced bone imaging techniques. (C) 2012 American Society for Bone and Mineral Research.
引用
收藏
页码:1397 / 1404
页数:8
相关论文
共 35 条
[1]   In vivo assessment of trabecular bone microarchitecture by high-resolution peripheral quantitative computed tomography [J].
Boutroy, S ;
Bouxsein, ML ;
Munoz, F ;
Delmas, PD .
JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 2005, 90 (12) :6508-6515
[2]   Finite element analysis based on in vivo HR-pQCT images of the distal radius is associated with wrist fracture in postmenopausal women [J].
Boutroy, Stephanie ;
Van Rietbergen, Bert ;
Sornay-Rendu, Elisabeth ;
Munoz, Francoise ;
Bouxsein, Mary L. ;
Delmas, Pierre D. .
JOURNAL OF BONE AND MINERAL RESEARCH, 2008, 23 (03) :392-399
[3]   COMPARING THE AREAS UNDER 2 OR MORE CORRELATED RECEIVER OPERATING CHARACTERISTIC CURVES - A NONPARAMETRIC APPROACH [J].
DELONG, ER ;
DELONG, DM ;
CLARKEPEARSON, DI .
BIOMETRICS, 1988, 44 (03) :837-845
[4]   A working guide to boosted regression trees [J].
Elith, J. ;
Leathwick, J. R. ;
Hastie, T. .
JOURNAL OF ANIMAL ECOLOGY, 2008, 77 (04) :802-813
[5]   Multiple additive regression trees with application in epidemiology [J].
Friedman, JH ;
Meulman, JJ .
STATISTICS IN MEDICINE, 2003, 22 (09) :1365-1381
[6]   Stochastic gradient boosting [J].
Friedman, JH .
COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2002, 38 (04) :367-378
[7]  
Friedman JH, 1999, 1999 REITZ LECT
[8]   Advanced Imaging assessment of bone quality [J].
Genant, Harry K. ;
Jiang, Yebin .
SKELETAL DEVELOPMENT AND REMODELING IN HEALTH, DISEASE, AND AGING, 2006, 1068 :410-428
[9]   Assessment of prevalent and incident vertebral fractures in osteoporosis research [J].
Genant, HK ;
Jergas, M .
OSTEOPOROSIS INTERNATIONAL, 2003, 14 (Suppl 3) :S43-S55
[10]  
Hastie T., 2009, ELEMENTS STAT LEARNI, DOI 10.1007/978-0-387-84858-7