Detection of fish nocardiosis by loop-mediated isothermal amplification

被引:37
作者
Itano, T.
Kawakami, H.
Kono, T.
Sakai, M.
机构
[1] Miyazaki Univ, Fac Agr, Miyazaki 8892192, Japan
[2] Ehime refectural Fish Dis Control Ctr, Uwajima, Ehime, Japan
关键词
fish pathogen; loop-mediated isothermal amplification; nocardiosis; polymerase chain reaction; yellowtail;
D O I
10.1111/j.1365-2672.2006.02872.x
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Aims: Loop-mediated isothermal amplification (LAMP) is a novel method that amplifies DNA with high specificity and rapidity under isothermal conditions. In this study, using the LAMP method, a protocol for detecting Nocardia seriolae which is a causative agent of fish nocardiosis, was designed. Methods and Results: A set of four primers, two inner and two outer, were designed based on the sequence of the 16S-23S ribosomal RNA internal transcribed spacer region of N. seriolae. Time and temperature conditions for detection of N. seriolae were optimized for 60 min at 65 degrees C. Other fish pathogen was not amplified by this LAMP system. The detection of N. seriola using LAMP was found to be more sensitive than that by polymerase chain reaction. Conclusions: LAMP is a highly sensitive and rapid diagnostic procedure for detection of N. seriolae. Significance and Impact of the Study: LAMP is a useful diagnostic method for fish nocardiosis.
引用
收藏
页码:1381 / 1387
页数:7
相关论文
共 14 条
[1]  
AUSTIN B, 1999, BACTERIAL FISH PATHO, P1
[2]   Rapid detection of a fish iridovirus using loop-mediated isothermal amplification (LAMP) [J].
Caipang, CMA ;
Haraguchi, I ;
Ohira, T ;
Hirono, I ;
Aoki, T .
JOURNAL OF VIROLOGICAL METHODS, 2004, 121 (02) :155-161
[3]   A loop mediated isothermal amplification (LAMP) method for detection of infectious hematopoietic necrosis virus (IHNV) in rainbow trout (Oncorhynchus mykiss) [J].
Gunimaladevi, I ;
Kono, T ;
LaPatra, SE ;
Sakai, M .
ARCHIVES OF VIROLOGY, 2005, 150 (05) :899-909
[4]   Detection of koi herpesvirus in common carp, Cyprinus carpio L., by loop-mediated isothermal amplification [J].
Gunimaladevi, I ;
Kono, T ;
Venugopal, MN ;
Sakai, M .
JOURNAL OF FISH DISEASES, 2004, 27 (10) :583-589
[5]   CULTURAL-CHARACTERISTICS OF THE BACTERIUM CAUSING JAUNDICE OF YELLOWTAIL, SERIOLA-QUINQUERADIATA [J].
IIDA, T ;
SORIMACHI, M .
FISH PATHOLOGY, 1994, 29 (01) :25-28
[6]  
Kariya T., 1968, FISH PATHOL, V3, P16, DOI [10.3147/JSFP.3.16, DOI 10.3147/JSFP.3.16]
[7]   Detection of white spot syndrome virus in shrimp by loop-mediated isothermal amplification [J].
Kono, T ;
Savan, R ;
Sakai, M ;
Itami, T .
JOURNAL OF VIROLOGICAL METHODS, 2004, 115 (01) :59-65
[8]   Sequencing of 16S-23S rRNA internal transcribed spacer and its application in the identification of Nocardia seriolae by polymerase chain reaction [J].
Kono, T ;
Ooyama, T ;
Chen, SC ;
Sakai, M .
AQUACULTURE RESEARCH, 2002, 33 (14) :1195-1197
[9]  
KUSUDA R, 1978, Fish Pathology, V13, P25
[10]   Detection of bacteria carrying the stx2 gene by in situ loop-mediated isothermal amplification [J].
Maruyama, F ;
Kenzaka, T ;
Yamaguchi, N ;
Tani, K ;
Nasu, M .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2003, 69 (08) :5023-5028