Type I 'antifreeze' proteins - Structure-activity studies and mechanisms of ice growth inhibition

被引:154
作者
Harding, MM [1 ]
Ward, LG
Haymet, ADJ
机构
[1] Univ Sydney, Sch Chem, Sydney, NSW 2006, Australia
[2] Univ Houston, Dept Chem, Houston, TX 77004 USA
[3] Univ Houston, Inst Mol Design, Houston, TX 77004 USA
来源
EUROPEAN JOURNAL OF BIOCHEMISTRY | 1999年 / 264卷 / 03期
关键词
antifreeze; fish; alpha-helices; hysteresis; ice; ice/water interface; proteins; sculpin; winter flounder;
D O I
10.1046/j.1432-1327.1999.00617.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The type I 'antifreeze' proteins, found in the body fluids of fish inhabiting polar oceans, are alanine-rich or-helical proteins that are able to inhibit the growth of ice. Within this class there are two distinct subclasses of proteins: those related to the winter flounder sequence HPLC6 and which contain Ii-residue repeat units commencing with threonine; and those from the sculpins that are unique in the N-terminal region that contains established helix breakers and lacks the 11-residue repeat structure present in the rest of the protein. Although 14 type I proteins have been isolated, almost all research has focused on HPLC6, the 37-residue protein from the winter flounder Pseudopleuronectes americanus. This protein modifies both the rate and shape (or 'habit') of ice crystal growth, displays hysteresis and accumulates specifically at the (2 0 (2) over bar 1) ice plane. Until very recently, all models to explain the mechanism for this specific interaction have relied on the interaction of the four threonine hydroxyls, which are spaced equally apart on one face of the helix, with the ice lattice. In contrast, proteins belonging to the sculpin family accumulate specifically at the (2 (1) over bar (1) over bar 0) plane. The molecular origin of this difference in specificity between the flounder and sculpin proteins is not understood. This review will summarize the structure-activity and molecular modelling and dynamics studies on HPLC6, with an emphasis on recent studies in which the threonine residues have been mutated. These studies have identified important hydrophobic contributions to the ice growth inhibition mechanism. Some 50 mutants of HPLC6 have been reported and the data is consistent with the following requirements for ice growth inhibition: (a) a minimum length of approx. 25 residues; (b) an alanine-rich sequence in order to induce a highly helical conformation; (c) a hydrophobic face; (d) a number of charged/polar residues which are involved in solubility and/or interaction with the ice surface. The emerging picture, that requires further dynamics studies including accurate modelling of the ice/water interface, suggests that a hydrophobic interaction between the surface of the protein and ice is the key to explaining accumulation at specific ice planes, and thus the molecular level mechanism for ice growth inhibition.
引用
收藏
页码:653 / 665
页数:13
相关论文
共 81 条
  • [51] LAL M, 1993, FARADAY DISCUSS, V95, P299
  • [52] ENANTIOSELECTIVE ADSORPTION OF THE D-FORMS AND L-FORMS OF AN ALPHA-HELICAL ANTIFREEZE POLYPEPTIDE TO THE (20(2)OVER-BAR-1) PLANES OF ICE
    LAURSEN, RA
    WEN, DY
    KNIGHT, CA
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (26) : 12057 - 12058
  • [53] Alternative roles for putative ice-binding residues in type I antifreeze protein
    Loewen, MC
    Chao, HM
    Houston, ME
    Baardsnes, J
    Hodges, RS
    Kay, CM
    Sykes, BD
    Sonnichsen, FD
    Davies, PL
    [J]. BIOCHEMISTRY, 1999, 38 (15) : 4743 - 4749
  • [54] INTERACTIONS OF THE D-FORM AND L-FORM OF WINTER FLOUNDER ANTIFREEZE PEPTIDE WITH THE (201) PLANES OF ICE
    MADURA, JD
    WIERZBICKI, A
    HARRINGTON, JP
    MAUGHON, RH
    RAYMOND, JA
    SIKES, CS
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (01) : 417 - 418
  • [55] Melt growth of tetrahydrofuran clathrate hydrate and its inhibition: method and first results
    Makogon, TY
    Larsen, R
    Knight, CA
    Sloan, ED
    [J]. JOURNAL OF CRYSTAL GROWTH, 1997, 179 (1-2) : 258 - 262
  • [56] BINDING OF AN ANTIFREEZE POLYPEPTIDE TO AN ICE WATER INTERFACE VIA COMPUTER-SIMULATION
    MCDONALD, SM
    WHITE, A
    CLANCY, P
    BRADY, JW
    [J]. AICHE JOURNAL, 1995, 41 (04) : 959 - 973
  • [57] MCDONALD SM, 1992, SOC CRYOB 29 ANN M C
  • [58] NG NF, 1986, J BIOL CHEM, V261, P5690
  • [59] NG NFL, 1992, J BIOL CHEM, V267, P16069
  • [60] A general method for constraining short peptides to an alpha-helical conformation
    Phelan, JC
    Skelton, NJ
    Braisted, AC
    McDowell, RS
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (03) : 455 - 460