A decade of plant proteomics and mass spectrometry: Translation of technical advancements to food security and safety issues

被引:58
作者
Agrawal, Ganesh Kumar [1 ]
Sarkar, Abhijit [1 ,2 ]
Righetti, Pier Giorgio [3 ]
Pedreschi, Romina [4 ]
Carpentier, Sebastien [5 ]
Wang, Tai [6 ]
Barkla, Bronwyn J. [7 ]
Kohli, Ajay [8 ]
Ndimba, Bongani Kaiser [9 ,10 ]
Bykova, Natalia V. [11 ,12 ]
Rampitsch, Christof [12 ]
Zolla, Lello [13 ]
Rafudeen, Mohamed Suhail [14 ]
Cramer, Rainer [15 ]
Bindschedler, Laurence Veronique [15 ]
Tsakirpaloglou, Nikolaos [8 ]
Ndimba, Roya Janeen [16 ]
Farrant, Jill M. [14 ]
Renaut, Jenny [17 ]
Job, Dominique [18 ]
Kikuchi, Shoshi [19 ]
Rakwal, Randeep [1 ,20 ,21 ]
机构
[1] Res Lab Biotechnol & Biochem RLABB, Kathmandu, Nepal
[2] Banaras Hindu Univ BHU, Lab Air Pollut & Global Climate Change, Dept Bot, Varanasi 221005, Uttar Pradesh, India
[3] Politecn Milan, Dipartimento Chim Mat & Ingn Chim G Natta, I-20131 Milan, Italy
[4] Univ Wageningen & Res Ctr, NL-6700 AA Wageningen, Netherlands
[5] Univ Louvain, Div Crop Biotech, Facil Syst Biol Driven Mass Spectrometry SYBIOMA, Louvain, Belgium
[6] Chinese Acad Sci, Key Lab Plant Mol Physiol, Inst Bot, Beijing 100093, Peoples R China
[7] Univ Nacl Autonoma Mexico, Inst Biotecnol, Cuernavaca 62250, Morelos, Mexico
[8] Int Rice Res Inst IRRI, Plant Mol Biol Lab, Plant Breeding Genet & Biotechnol Div, Manila, Philippines
[9] Infruitec, Prote Unit, Biotechnol Platform, Agr Res Council, Stellenbosch, South Africa
[10] Univ Western Cape, Prote Res Grp, Dept Biotechnol, ZA-7535 Bellville, South Africa
[11] Mem Univ Newfoundland, Dept Biol, St John, NF A1B 3X9, Canada
[12] Agr & Agri Food Canada, Cereal Res Ctr, Winnipeg, MB R3T 2M9, Canada
[13] Univ Tuscia, Dept Ecol & Biol, I-01100 Viterbo, Italy
[14] Univ Cape Town, Dept Mol & Cell Biol, ZA-7701 Rondebosch, South Africa
[15] Univ Reading, Dept Chem BioCtr, Reading RG6 6AS, Berks, England
[16] IThemba LABS Natl Res Fdn, Cape Town, South Africa
[17] Ctr Rech Publ Gabriel Lippman, Dept Environm & Agrobiotechnol EVA, Belvaux, GD, Luxembourg
[18] Bayer CropSci, CNRS UCBL INSA Bayer CropSci Joint Lab, UMR 5240, F-69263 Lyon, France
[19] Natl Inst Agrobiol Sci NIAS, Plant Genome Res Unit, Agrogen Res Ctr, Tsukuba, Ibaraki 3058602, Japan
[20] Univ Tsukuba, Grad Sch Life & Environm Sci, Tsukuba, Ibaraki 3058572, Japan
[21] Showa Univ Sch Med, Dept Anat 1, Shinagawa, Tokyo 1428555, Japan
基金
英国生物技术与生命科学研究理事会; 日本学术振兴会;
关键词
biomarkers; environment; food safety; food security; INPPO; plant proteomics; translational proteomics; 2-DIMENSIONAL GEL-ELECTROPHORESIS; SAMPLE EXTRACTION TECHNIQUES; GENETICALLY-MODIFIED CROPS; NON-MODEL PLANTS; LIQUID-CHROMATOGRAPHY; QUANTITATIVE PROTEOMICS; RICE PROTEOMICS; INTERROGATE ALTERATIONS; FUNCTIONAL GENOMICS; SYSTEMS BIOLOGY;
D O I
10.1002/mas.21365
中图分类号
O433 [光谱学];
学科分类号
070207 [光学];
摘要
Tremendous progress in plant proteomics driven by mass spectrometry (MS) techniques has been made since 2000 when few proteomics reports were published and plant proteomics was in its infancy. These achievements include the refinement of existing techniques and the search for new techniques to address food security, safety, and health issues. It is projected that in 2050, the world's population will reach 9-12 billion people demanding a food production increase of 34-70% (FAO, 2009) from today's food production. Provision of food in a sustainable and environmentally committed manner for such a demand without threatening natural resources, requires that agricultural production increases significantly and that postharvest handling and food manufacturing systems become more efficient requiring lower energy expenditure, a decrease in postharvest losses, less waste generation and food with longer shelf life. There is also a need to look for alternative protein sources to animal based (i.e., plant based) to be able to fulfill the increase in protein demands by 2050. Thus, plant biology has a critical role to play as a science capable of addressing such challenges. In this review, we discuss proteomics especially MS, as a platform, being utilized in plant biology research for the past 10 years having the potential to expedite the process of understanding plant biology for human benefits. The increasing application of proteomics technologies in food security, analysis, and safety is emphasized in this review. But, we are aware that no unique approach/technology is capable to address the global food issues. Proteomics-generated information/resources must be integrated and correlated with other omics-based approaches, information, and conventional programs to ensure sufficient food and resources for human development now and in the future. (c) 2013 Wiley Periodicals, Inc. Rapid Commun. Mass Spectrom. 32: 335-365, 2013.
引用
收藏
页码:335 / 365
页数:31
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