Gene expression profiling in single cells within tissue

被引:41
作者
Capodieci, P
Donovan, M
Buchinsky, H
Jeffers, Y
Cordon-Cardo, C
Gerald, W
Edelson, J
Shenoy, SM
Singer, RH
机构
[1] Aureon Labs, Yonkers, NY 10701 USA
[2] Mem Sloan Kettering Canc Ctr, New York, NY 10021 USA
[3] Albert Einstein Coll Med, Bronx, NY 10461 USA
关键词
D O I
10.1038/NMETH786
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We developed a robust multiplex fluorescent in situ hybridization (FISH) technique in archival formalin-fixed, paraffin-embedded (FFPE) human tissue sections while preserving the microanatomical context. This identifies single-cell gene expression patterns by probing multiple, unique nascent RNA transcripts and yields predictive quantitative gene expression signatures.
引用
收藏
页码:663 / 665
页数:3
相关论文
共 15 条
[11]   Genomics, gene expression and DNA arrays [J].
Lockhart, DJ ;
Winzeler, EA .
NATURE, 2000, 405 (6788) :827-836
[12]   MicroRNA expression profiles classify human cancers [J].
Lu, J ;
Getz, G ;
Miska, EA ;
Alvarez-Saavedra, E ;
Lamb, J ;
Peck, D ;
Sweet-Cordero, A ;
Ebet, BL ;
Mak, RH ;
Ferrando, AA ;
Downing, JR ;
Jacks, T ;
Horvitz, HR ;
Golub, TR .
NATURE, 2005, 435 (7043) :834-838
[13]   A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer [J].
Paik, S ;
Shak, S ;
Tang, G ;
Kim, C ;
Baker, J ;
Cronin, M ;
Baehner, FL ;
Walker, MG ;
Watson, D ;
Park, T ;
Hiller, W ;
Fisher, ER ;
Wickerham, DL ;
Bryant, J ;
Wolmark, N .
NEW ENGLAND JOURNAL OF MEDICINE, 2004, 351 (27) :2817-2826
[14]   A gene-expression signature as a predictor of survival in breast cancer. [J].
van de Vijver, MJ ;
He, YD ;
van 't Veer, LJ ;
Dai, H ;
Hart, AAM ;
Voskuil, DW ;
Schreiber, GJ ;
Peterse, JL ;
Roberts, C ;
Marton, MJ ;
Parrish, M ;
Atsma, D ;
Witteveen, A ;
Glas, A ;
Delahaye, L ;
van der Velde, T ;
Bartelink, H ;
Rodenhuis, S ;
Rutgers, ET ;
Friend, SH ;
Bernards, R .
NEW ENGLAND JOURNAL OF MEDICINE, 2002, 347 (25) :1999-2009
[15]  
Wilson AJ, 2002, CANCER RES, V62, P6006