Structural e-bioinformatics and drug design

被引:8
作者
Carpy, AJM [1 ]
Marchand-Geneste, N [1 ]
机构
[1] Univ Bordeaux 1, CNRS, UMR 5472, Lab Physico & Toxicochim Syst Nat, F-33405 Talence, France
关键词
Internet; bioinformatics; database searching; sequence hornology; docking; drug design;
D O I
10.1080/10659360600560966
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Nowadays the in silico scenario for drug design is totally dependent on structural biology and structural bioinformatics. A myriad of free bioinformatics applications and services have been posted on the web. This mini-review mentions web sites that are useful in structure-based drug design. The information is given in a logical manner, following the drug design process i.e. characterization of a protein target, modelling the protein using sequence homology, optimization of the protein structure and finally docking of small ligands into the active site.
引用
收藏
页码:1 / 10
页数:10
相关论文
共 79 条
  • [1] BASIC LOCAL ALIGNMENT SEARCH TOOL
    ALTSCHUL, SF
    GISH, W
    MILLER, W
    MYERS, EW
    LIPMAN, DJ
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) : 403 - 410
  • [2] [Anonymous], TINKER, P508
  • [3] [Anonymous], UNIPROTKB SWISS PROT
  • [4] [Anonymous], GENBANK DATABASE
  • [5] [Anonymous], PYMOL
  • [6] [Anonymous], UniProt: The Universal Protein Resource
  • [7] [Anonymous], SHAPE
  • [8] [Anonymous], NCBI National Center for Biotechnology Information
  • [9] [Anonymous], PDB PROTEIN DATA BAN
  • [10] [Anonymous], Human Genome Project