Reconciling Estimates of Cell Proliferation from Stable Isotope Labeling Experiments

被引:17
作者
Ahmed, Raya [1 ]
Westera, Liset [2 ]
Drylewicz, Julia [2 ,3 ]
Elemans, Marjet [4 ]
Zhang, Yan [1 ]
Kelly, Elizabeth [1 ]
Reljic, Rajko [1 ]
Tesselaar, Kiki [2 ]
de Boer, Rob J. [3 ]
Macallan, Derek C. [1 ]
Borghans, Jose A. M. [2 ]
Asquith, Becca [4 ]
机构
[1] Univ London, Inst Infect & Immun, London, England
[2] Univ Med Ctr Utrecht, Dept Immunol, Lab Translat Immunol, Utrecht, Netherlands
[3] Univ Utrecht, Theoret Biol & Bioinformat, NL-3508 TC Utrecht, Netherlands
[4] Univ London Imperial Coll Sci Technol & Med, Dept Med, London, England
基金
英国医学研究理事会; 英国惠康基金;
关键词
IN-VIVO DYNAMICS; NAIVE T-CELLS; HIV-1; INFECTION; RAPID TURNOVER; HUMANS; KINETICS; LYMPHOCYTES; MICE; GLUCOSE; DNA;
D O I
10.1371/journal.pcbi.1004355
中图分类号
Q5 [生物化学];
学科分类号
070307 [化学生物学];
摘要
Stable isotope labeling is the state of the art technique for in vivo quantification of lymphocyte kinetics in humans. It has been central to a number of seminal studies, particularly in the context of HIV-1 and leukemia. However, there is a significant discrepancy between lymphocyte proliferation rates estimated in different studies. Notably, deuterated H-2(2)-glucose (D-2-glucose) labeling studies consistently yield higher estimates of proliferation than deuterated water (D2O) labeling studies. This hampers our understanding of immune function and undermines our confidence in this important technique. Whether these differences are caused by fundamental biochemical differences between the two compounds and/or by methodological differences in the studies is unknown. D-2-glucose and D2O labeling experiments have never been performed by the same group under the same experimental conditions; consequently a direct comparison of these two techniques has not been possible. We sought to address this problem. We performed both in vitro and murine in vivo labeling experiments using identical protocols with both D-2-glucose and D2O. This showed that intrinsic differences between the two compounds do not cause differences in the proliferation rate estimates, but that estimates made using D-2-glucose in vivo were susceptible to difficulties in normalization due to highly variable blood glucose enrichment. Analysis of three published human studies made using D-2-glucose and D2O confirmed this problem, particularly in the case of short term D-2-glucose labeling. Correcting for these inaccuracies in normalization decreased proliferation rate estimates made using D-2-glucose and slightly increased estimates made using D2O; thus bringing the estimates from the two methods significantly closer and highlighting the importance of reliable normalization when using this technique.
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页数:23
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