Comparison of four multiplex PCR assays for the detection of viral pathogens in respiratory specimens

被引:43
作者
Anderson, Trevor P. [1 ]
Werno, Anja M. [1 ]
Barratt, Kevin [1 ]
Mahagamasekera, Patalee [1 ]
Murdoch, David R. [1 ,2 ]
Jennings, Lance C. [1 ,2 ]
机构
[1] Canterbury Hlth Labs, Microbiol Unit, Christchurch, New Zealand
[2] Univ Otago, Dept Pathol, Christchurch, New Zealand
关键词
Respiratory viruses; Multiplex PCR; Real-time PCR; REAL-TIME PCR; RT-PCR; INFLUENZA-A; VIRUS PANEL; INFECTION; PERFORMANCE; DIAGNOSIS; CHILDREN; DNA;
D O I
10.1016/j.jviromet.2013.04.005
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Multiplex PCR has become the test of choice for the detection of multiple respiratory viruses in clinical specimens. However, there are few direct comparisons of different PCR assays. This study compares 4 different multiplex PCR assays for the recovery of common respiratory viruses. We tested 213 respiratory specimens using four different multiplex PCR assays: the xTAG respiratory viral panel fast (Abbott Molecular Laboratories), Fast-track Respiratory Pathogen assay (Fast-track Diagnostics), Easyplex respiratory pathogen 12 kit (Ausdiagnostics), and an in-house multiplex real-time PCR assay. The performance of the four assays was very similar, with 93-100% agreement for all comparisons. Other issues, such as through-put, technical requirements and cost, are likely to be as important for making a decision about which of these assays to use given their comparative performance. (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:118 / 121
页数:4
相关论文
共 19 条
[1]   Development of three multiplex RT-PCR assays for the detection of 12 respiratory RNA viruses [J].
Bellau-Pujol, S ;
Vabret, A ;
Legrand, L ;
Dina, J ;
Gouarin, S ;
Petitjean-Lecherbonnier, J ;
Pozzetto, B ;
Ginevra, C ;
Freymuth, F .
JOURNAL OF VIROLOGICAL METHODS, 2005, 126 (1-2) :53-63
[2]   Multiplex MassTag-PCR for respiratory pathogens in pediatric nasopharyngeal washes negative by conventional diagnostic testing shows a high prevalence of viruses belonging to a newly recognized rhinovirus clade [J].
Dominguez, Samuel R. ;
Briese, Thomas ;
Palacios, Gustavo ;
Hui, Jeffrey ;
Villari, Joseph ;
Kapoor, Vishal ;
Tokarz, Rafal ;
Glode, Mary P. ;
Anderson, Marsha S. ;
Robinson, Christine C. ;
Holmes, Kathryn V. ;
Lipkin, W. Ian .
JOURNAL OF CLINICAL VIROLOGY, 2008, 43 (02) :219-222
[3]   Usefulness of Published PCR Primers in Detecting Human Rhinovirus Infection [J].
Faux, Cassandra E. ;
Arden, Katherine E. ;
Lambert, Stephen B. ;
Nissen, Michael D. ;
Nolan, Terry M. ;
Chang, Anne B. ;
Sloots, Theo P. ;
Mackay, Ian M. .
EMERGING INFECTIOUS DISEASES, 2011, 17 (02) :296-298
[4]   Comparison of the Luminex Respiratory Virus Panel Fast Assay with In-House Real-Time PCR for Respiratory Viral Infection Diagnosis [J].
Gadsby, Naomi J. ;
Hardie, Alison ;
Claas, Eric C. J. ;
Templeton, Kate E. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2010, 48 (06) :2213-2216
[5]   Comparison of the performance of direct fluorescent antibody staining, a point-of-care rapid antigen test and virus isolation with that of RT-PCR for the detection of novel 2009 influenza A (H1N1) virus in respiratory specimens [J].
Ganzenmueller, Tina ;
Kluba, Jeanette ;
Hilfrich, Birgit ;
Puppe, Wolfram ;
Verhagen, Willem ;
Heim, Albert ;
Schulz, Thomas ;
Henke-Gendo, Cornelia .
JOURNAL OF MEDICAL MICROBIOLOGY, 2010, 59 (06) :713-717
[6]   Likelihood that an Unsubtypeable Influenza A Virus Result Obtained with the Luminex xTAG Respiratory Virus Panel Is Indicative of Infection with Novel A/H1N1 (Swine-Like) Influenza Virus [J].
Ginocchio, Christine C. ;
St. George, Kirsten .
JOURNAL OF CLINICAL MICROBIOLOGY, 2009, 47 (07) :2347-2348
[7]   Using multiplex real time PCR in order to streamline a routine diagnostic service [J].
Gunson, R. N. ;
Bennett, S. ;
Maclean, A. ;
Carman, W. F. .
JOURNAL OF CLINICAL VIROLOGY, 2008, 43 (04) :372-375
[8]   Real-time RT-PCR detection of 12 respiratory viral infections in four triplex reactions [J].
Gunson, RN ;
Collins, TC ;
Carman, WF .
JOURNAL OF CLINICAL VIROLOGY, 2005, 33 (04) :341-344
[9]   Rapid and quantitative detection of human adenovirus DNA by real-time PCR [J].
Heim, A ;
Ebnet, C ;
Harste, G ;
Pring-Åkerblom, P .
JOURNAL OF MEDICAL VIROLOGY, 2003, 70 (02) :228-239
[10]   Frequent Detection of Respiratory Viruses without Symptoms: Toward Defining Clinically Relevant Cutoff Values [J].
Jansen, Rogier R. ;
Wieringa, Joanne ;
Koekkoek, Sylvie M. ;
Visser, Caroline E. ;
Pajkrt, Dasja ;
Molenkamp, Richard ;
de Jong, Menno D. ;
Schinkel, Janke .
JOURNAL OF CLINICAL MICROBIOLOGY, 2011, 49 (07) :2631-2636