Structural Characterization of a Thiazoline-Containing Chromophore in an Orange Fluorescent Protein, Monomeric Kusabira Orange

被引:46
作者
Kikuchi, Akihiro [1 ]
Fukumura, Eiko [1 ,2 ]
Karasawa, Satoshi [3 ,4 ,5 ]
Mizuno, Hideaki [3 ]
Miyawaki, Atsushi [3 ]
Shiro, Yoshitsugu [1 ]
机构
[1] RIKEN SPring 8 Ctr, Biomet Sci Lab, Sayo, Hyogo 6795148, Japan
[2] Univ Hyogo, Himeji Inst Technol, Grad Sch Sci, Dept Life Sci, Ako, Hyogo 6781297, Japan
[3] RIKEN, Brain Sci Inst, Lab Cell Funct & Dynam, Adv Technol Dev Grp, Wako, Saitama 3510198, Japan
[4] Amalgaam Co Ltd, Itabashi Ku, Tokyo 1730004, Japan
[5] Med & Biol Labs Co Ltd, Naka Ku, Aichi 4600002, Japan
关键词
D O I
10.1021/bi800727v
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Monomeric Kusabira Orange (mKO) is a green fluorescent protein (GFP)-like protein that emits orange light at a peak of 559 nm. We analyzed its X-ray structure at 1.65 angstrom and found a novel three-ring chromophore that developed autocatalytically from a Cys65-Tyr66-Glu67 tripeptide in which the side chain of Cys65 formed the third 2-hydroxy-3-thiazoline ring. As a result, the chromophore contained the C=NCOH group at the 2-position of the imidazolinone moiety such that the conjugated pi-electron system of the chromophore was more extended than that of GFP but less extended than that of the Discosoma sp. red fluorescent protein (DsRed). Since a sulfur atom has potent nucleophilic character, the third 3-thiazoline ring is rapidly and completely cyclized. Furthermore, our structure reveals the presence of a pi-pi stacking interaction between His197 and the chromophore as well as a pi-cation interaction between Arg69 and the chromophore. These structural findings are sufficient to account for the orange emission, pH tolerance, and photostability of mKO.
引用
收藏
页码:11573 / 11580
页数:8
相关论文
共 28 条
[1]   The Cambridge Structural Database: a quarter of a million crystal structures and rising [J].
Allen, FH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 2002, 58 (3 PART 1) :380-388
[2]   Expansion of the genetic code enables design of a novel "gold'' class of green fluorescent proteins [J].
Bae, JH ;
Rubini, M ;
Jung, G ;
Wiegand, G ;
Seifert, MHJ ;
Azim, MK ;
Kim, JS ;
Zumbusch, A ;
Holak, TA ;
Moroder, L ;
Huber, R ;
Budisa, N .
JOURNAL OF MOLECULAR BIOLOGY, 2003, 328 (05) :1071-1081
[3]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[4]   Cation-π interaction in a folded polypeptide [J].
Burghardt, TP ;
Juranic, N ;
Macura, S ;
Ajtai, K .
BIOPOLYMERS, 2002, 63 (04) :261-272
[5]   Crystal structures and mutational analysis of amFP486, a cyan fluorescent protein from Anemonia majano [J].
Henderson, JN ;
Remington, SJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (36) :12712-12717
[6]   Cyan-emitting and orange-emitting fluorescent proteins as a donor/acceptor pair for fluorescence resonance energy transfer [J].
Karasawa, S ;
Araki, T ;
Nagai, T ;
Mizuno, H ;
Miyawaki, A .
BIOCHEMICAL JOURNAL, 2004, 381 :307-312
[7]   Diversity and evolution of the green fluorescent protein family [J].
Labas, YA ;
Gurskaya, NG ;
Yanushevich, YG ;
Fradkov, AF ;
Lukyanov, KA ;
Lukyanov, SA ;
Matz, MV .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (07) :4256-4261
[8]  
Lamzin VS, 2001, INT TABLES CRYSTALLO, VF, P720
[9]   PROCHECK - A PROGRAM TO CHECK THE STEREOCHEMICAL QUALITY OF PROTEIN STRUCTURES [J].
LASKOWSKI, RA ;
MACARTHUR, MW ;
MOSS, DS ;
THORNTON, JM .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1993, 26 :283-291
[10]   Fluorescent proteins from nonbioluminescent Anthozoa species [J].
Matz, MV ;
Fradkov, AF ;
Labas, YA ;
Savitsky, AP ;
Zaraisky, AG ;
Markelov, ML ;
Lukyanov, SA .
NATURE BIOTECHNOLOGY, 1999, 17 (10) :969-973