Stable isotope coded derivatizing reagents as internal standards in metabolite profiling

被引:93
作者
Bruheim, Per [1 ]
Kvitvang, Hans Fredrik Nyvold [1 ]
Villas-Boas, Silas G. [2 ]
机构
[1] Norwegian Univ Sci & Technol, Dept Biotechnol, N-7034 Trondheim, Norway
[2] Univ Auckland, Sch Biol Sci, Ctr Microbial Innovat, Auckland 1142, New Zealand
关键词
Isotope labeled derivatizing reagent; GC-MS; LC-MS; Metabolomics; Metabolite Profiling; Mass tags; IONIZATION-MASS-SPECTROMETRY; N-LINKED GLYCANS; ELECTROSPRAY-IONIZATION; LIQUID-CHROMATOGRAPHY; GAS-CHROMATOGRAPHY; RELATIVE QUANTIFICATION; CHEMICAL DERIVATIZATION; QUANTITATIVE-ANALYSIS; CORYNEBACTERIUM-GLUTAMICUM; MICROBIAL METABOLOMICS;
D O I
10.1016/j.chroma.2013.03.072
中图分类号
Q5 [生物化学];
学科分类号
070307 [化学生物学];
摘要
Gas chromatography (GC) and liquid chromatography (LC) coupled to mass spectrometric (MS) detection have become the two main techniques for the analysis of metabolite pools (i.e. Metabolomics). These technologies are especially suited for Metabolite Profiling analysis of various metabolite groups due to high separation capabilities of the chromatographs and high sensitivity of the mass analysers. The trend in quantitative Metabolite Profiling is to add more metabolites and metabolite groups in a single method. This should not be done by compromising the analytical precision. Mass spectrometric detection comes with certain limitations, especially in the quantitative aspects as standards are needed for conversion of ion abundance to concentration and ionization efficiencies are directly dependent on eluent conditions. This calls for novel strategies to counteract all variables that can influence the quantitative precision. Usually, internal standards are used to correct any technical variation. For quantitation of single or just a few analytes this can be executed with spiking isotopically labeled standards. However, for more comprehensive analytical tasks, e.g. profiling tens or hundreds of analytes simultaneously, this strategy becomes expensive and in many cases isotopically labeled standards are not available. An alternative is to introduce a derivatizing step where the sample is derivatized with naturally labeled reagent, while a standard solution is separately derivatized with isotopically labeled reagent and spiked into the sample solution prior to analysis. This strategy, named isotope coded derivatization - ICD, is attractive in the emerging field of quantitative Metabolite Profiling where current protocols can easily comprise over hundred metabolites. This review provides an overview of isotopically labeled derivatizing reagents that have been developed for important metabolite groups with the aim to improve analytical performance and precision. (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:196 / 203
页数:8
相关论文
共 86 条
[1]
Poly(ethylene glycol)-Based Stable Isotope Labeling Reagents for the Quantitative Analysis of Low Molecular Weight Metabolites by LC-MS [J].
Abello, Nicolas ;
Geurink, Paul P. ;
van der Toorn, Marco ;
van Oosterhout, Antoon J. M. ;
Lugtenburg, Johan ;
van der Marel, Gijs A. ;
Kerstjens, Huib A. M. ;
Postma, Dirkje S. ;
Overkleeft, Hermen S. ;
Bischoff, Rainer .
ANALYTICAL CHEMISTRY, 2008, 80 (23) :9171-9180
[2]
Quantitation by isobaric labeling: Applications to glycomics [J].
Atwood, James A., III ;
Cheng, Lei ;
Alvarez-Manilla, Gerardo ;
Warren, Nicole L. ;
York, William S. ;
Orlando, Ron .
JOURNAL OF PROTEOME RESEARCH, 2008, 7 (01) :367-374
[3]
Separation and quantitation of water soluble cellular metabolites by hydrophilic interaction chromatography-tandem mass spectrometry [J].
Bajad, Sunil U. ;
Lu, Wenyun ;
Kimball, Elizabeth H. ;
Yuan, Jie ;
Peterson, Celeste ;
Rabinowitz, Joshua D. .
JOURNAL OF CHROMATOGRAPHY A, 2006, 1125 (01) :76-88
[4]
Analysis of cell membrane aminophospholipids as isotope-tagged derivatives [J].
Berry, KAZ ;
Murphy, RC .
JOURNAL OF LIPID RESEARCH, 2005, 46 (05) :1038-1046
[5]
Tags for the stable isotopic labeling of carbohydrates and quantitative analysis by mass spectrometry [J].
Bowman, Michael J. ;
Zaia, Joseph .
ANALYTICAL CHEMISTRY, 2007, 79 (15) :5777-5784
[6]
Comparative Glycomics Using a Tetraplex Stable-Isotope Coded Tag [J].
Bowman, Michael J. ;
Zaia, Joseph .
ANALYTICAL CHEMISTRY, 2010, 82 (07) :3023-3031
[7]
Busch KL, 2010, SPECTROSCOPY, V25, P18
[8]
Practical implications of some recent studies in electrospray ionization fundamentals [J].
Cech, NB ;
Enke, CG .
MASS SPECTROMETRY REVIEWS, 2001, 20 (06) :362-387
[9]
Effect of affinity for droplet surfaces on the fraction of analyte molecules charged during electrospray droplet fission [J].
Cech, NB ;
Enke, CG .
ANALYTICAL CHEMISTRY, 2001, 73 (19) :4632-4639
[10]
Deng P, 2012, BIOANALYSIS, V4, P49, DOI [10.4155/BIO.11.298, 10.4155/bio.11.298]