Diverse and unique picocyanobacteria in Chesapeake Bay, revealed by 16S-23S rRNA internal transcribed Spacer sequences

被引：93

作者：

Chen, F

Wang, K

Kan, JJ

Suzuki, MT

Wommack, KE

机构：

[1] Univ Maryland, Inst Biotechnol, Ctr Marine Biotechnol, Baltimore, MD 21202 USA

[2] Chesapeake Biol Lab, Solomons, MD 20688 USA

[3] Delaware Biotechnol Inst, Newark, DE 19711 USA

来源：

APPLIED AND ENVIRONMENTAL MICROBIOLOGY | 2006年 / 72卷 / 03期

关键词：

D O I：

10.1128/AEM.72.3.2239-2243.2006

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

rRNA internal transcribed spacer phylogeny showed that Chesapeake Bay is populated with diverse Synechococcus strains, including members of the poorly studied marine cluster B. Marine cluster B prevailed in the upper bay, while marine cluster A was common in the lower bay. Interestingly, marine cluster B Synechococcus included phycocyanin- and phycoerythrin-rich strains.

引用

收藏

页码：2239 / 2243

页数：5

相关论文

共 34 条

[11]

HERDMAN M, 1924, BERGEYS MANUAL SYSTE, V1, P493

[12] Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains [J].

Honda, D ;

Yokota, A ;

Sugiyama, J .

JOURNAL OF MOLECULAR EVOLUTION, 1999, 48 (06) :723-739

[13] Comparison of conserved structural and regulatory domains within divergent 16S rRNA-23S rRNA spacer sequences of cyanobacteria [J].

Iteman, I ;

Rippka, R ;

de Marsac, NT ;

Herdman, M .

MICROBIOLOGY-SGM, 2000, 146 :1275-1286

[14] High-resolution differentiation of cyanobacteria by using rRNA-internal transcribed spacer denaturing gradient gel electrophoresis [J].

Janse, I ;

Meima, M ;

Kardinaal, WEA ;

Zwart, G .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2003, 69 (11) :6634-6643

[15]

KAN J, IN PRESS AQUAT MICRO

[16] MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment [J].

Kumar, S ;

Tamura, K ;

Nei, M .

BRIEFINGS IN BIOINFORMATICS, 2004, 5 (02) :150-163

[17] Genotyping of axenic and non-axenic isolates of the genus Prochlorococcus and the OMF-'Synechococcus' clade by size, sequence analysis or RFLP of the Internal Transcribed Spacer of the ribosomal operon [J].

Laloui, W ;

Palinska, KA ;

Rippka, R ;

Partensky, F ;

de Marsac, NT ;

Herdman, M ;

Iteman, I .

MICROBIOLOGY-SGM, 2002, 148 :453-465

[18] AUTOTROPHIC PICOPLANKTON IN THE TROPICAL OCEAN [J].

LI, WKW ;

RAO, DVS ;

HARRISON, WG ;

SMITH, JC ;

CULLEN, JJ ;

IRWIN, B ;

PLATT, T .

SCIENCE, 1983, 219 (4582) :292-295

[19] PICOPLANKTON CARBON FLUX IN CHESAPEAKE BAY [J].

MALONE, TC ;

DUCKLOW, HW ;

PEELE, ER ;

PIKE, SE .

MARINE ECOLOGY PROGRESS SERIES, 1991, 78 (01) :11-22

[20] Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes [J].

Moore, LR ;

Rocap, G ;

Chisholm, SW .

NATURE, 1998, 393 (6684) :464-467

← 1 2 3 4 →