Synthesis and investigation of the 5-formylcytidine modified, anticodon stem and loop of the human mitochondrial tRNAMet

被引:45
作者
Lusic, Hrvoje [2 ]
Gustilo, Estella M. [1 ]
Vendeix, Franck A. P. [1 ]
Kaiser, Rob [3 ]
Delaney, Michael O. [3 ]
Graham, William D. [1 ]
Moye, Virginia A. [1 ]
Cantara, William A. [1 ]
Agris, Paul F. [1 ]
Deiters, Alexander [2 ]
机构
[1] N Carolina State Univ, Dept Mol & Struct Biochem, Raleigh, NC 27695 USA
[2] N Carolina State Univ, Dept Chem, Raleigh, NC 27695 USA
[3] Dharmacon, Lafayette, CO 80026 USA
关键词
D O I
10.1093/nar/gkn703
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Human mitochondrial methionine transfer RNA (hmtRNA(CAU)(MET)) has a unique post-transcriptional modification, 5-formylcytidine, at the wobble position-34 (f(5)C(34)). The role of this modification in hmtRNA(CAU)(MET) for the decoding of AUA, as well as AUG, in both the peptidyl- and aminoacyl-sites of the ribosome in either chain initiation or chain elongation is still unknown. We report the first synthesis and analyses of the tRNA's anticodon stem and loop domain containing the 5-formylcytidine modification. The modification contributes to the tRNA's anticodon domain structure, thermodynamic properties and its ability to bind codons AUA and AUG in translational initiation and elongation.
引用
收藏
页码:6548 / 6557
页数:10
相关论文
共 44 条
[1]   SEQUENCE AND ORGANIZATION OF THE HUMAN MITOCHONDRIAL GENOME [J].
ANDERSON, S ;
BANKIER, AT ;
BARRELL, BG ;
DEBRUIJN, MHL ;
COULSON, AR ;
DROUIN, J ;
EPERON, IC ;
NIERLICH, DP ;
ROE, BA ;
SANGER, F ;
SCHREIER, PH ;
SMITH, AJH ;
STADEN, R ;
YOUNG, IG .
NATURE, 1981, 290 (5806) :457-465
[2]   Role of modified nucleosides of yeast tRNAPhe in ribosomal binding [J].
Ashraf, SS ;
Guenther, RH ;
Ansari, G ;
Malkiewicz, A ;
Sochacka, E ;
Agris, PF .
CELL BIOCHEMISTRY AND BIOPHYSICS, 2000, 33 (03) :241-252
[3]   CORRELATION OF PROTON AND N-15 CHEMICAL-SHIFTS BY MULTIPLE QUANTUM NMR [J].
BAX, A ;
GRIFFEY, RH ;
HAWKINS, BL .
JOURNAL OF MAGNETIC RESONANCE, 1983, 55 (02) :301-315
[4]   SENSITIVITY-ENHANCED TWO-DIMENSIONAL HETERONUCLEAR SHIFT CORRELATION NMR-SPECTROSCOPY [J].
BAX, A ;
SUBRAMANIAN, S .
JOURNAL OF MAGNETIC RESONANCE, 1986, 67 (03) :565-569
[5]   The Amber biomolecular simulation programs [J].
Case, DA ;
Cheatham, TE ;
Darden, T ;
Gohlke, H ;
Luo, R ;
Merz, KM ;
Onufriev, A ;
Simmerling, C ;
Wang, B ;
Woods, RJ .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 2005, 26 (16) :1668-1688
[6]   CODON-ANTICODON PAIRING - WOBBLE HYPOTHESIS [J].
CRICK, FHC .
JOURNAL OF MOLECULAR BIOLOGY, 1966, 19 (02) :548-&
[7]  
deBarros JPP, 1996, NUCLEIC ACIDS RES, V24, P1489
[8]   The contribution of mitochondria to common disorders [J].
Enns, GM .
MOLECULAR GENETICS AND METABOLISM, 2003, 80 (1-2) :11-26
[9]   Uniform binding of aminoacylated transfer RNAs to the ribosomal A and P sites [J].
Fahlman, RP ;
Dale, T ;
Uhlenbeck, OC .
MOLECULAR CELL, 2004, 16 (05) :799-805
[10]   QUANTITATIVE ENZYMATIC-HYDROLYSIS OF TRANSFER-RNAS - REVERSED-PHASE HIGH-PERFORMANCE LIQUID-CHROMATOGRAPHY OF TRANSFER-RNA NUCLEOSIDES [J].
GEHRKE, CW ;
KUO, KC ;
MCCUNE, RA ;
GERHARDT, KO ;
AGRIS, PF .
JOURNAL OF CHROMATOGRAPHY, 1982, 230 (02) :297-308