Diamonds in the rough:: mRNA-like non-coding RNAs

被引：67

作者：

Rymarquis, Linda A. ^{[1
]}

Kastenmayer, James P.

Huettenhofer, Alexander G. ^{[2
]}

Green, Pamela J. ^{[1
]}

机构：

[1] Univ Delaware, Delaware Biotechnol Inst, Newark, DE 19711 USA

[2] Innsbruck Med Univ, Div Genom & RNom, Innsbruck Bioctry, A-6020 Innsbruck, Austria

来源：

TRENDS IN PLANT SCIENCE | 2008年 / 13卷 / 07期

基金：

美国国家科学基金会;

关键词：

D O I：

10.1016/j.tplants.2008.02.009

中图分类号：

Q94 [植物学];

学科分类号：

071001 ;

摘要：

Non-coding RNAs are increasingly being identified as crucial regulators of gene expression and other cellular functions in plants. Experimental and computational methods have revealed the existence of mRNA-like non-coding RNAs (mIncRNAs), a class of non-coding RNAs that, in plants, are associated with tissue-specific expression, development and the phosphate-starvation response. Although their mechanisms of action are largely unknown, one can speculate that mIncRNAs act through secondary structures or specific sequences that bind to proteins or metabolites, or that have catalytic activity. This review summarizes the computational methods developed to identify candidate mIncRNAs, and the current experimental evidence regarding the function of several known mIncRNAs.

引用

页码：329 / 334

页数：6

共 77 条

[71] Expression of the OsPI1 gene, cloned from rice roots using cDNA microarray, rapidly responds to phosphorus status [J].

Wasaki, J ;

Yonetani, R ;

Shinano, T ;

Kai, M ;

Osaki, M .

NEW PHYTOLOGIST, 2003, 158 (02) :239-248

[72]

Wen Jiayu, 2007, In Silico Biology, V7, P485

[73] Xist function:: bridging chromatin and stem cells [J].

Wutz, Anton .

TRENDS IN GENETICS, 2007, 23 (09) :457-464

[74] The European ribosomal RNA database [J].

Wuyts, J ;

Perrière, G ;

Van de Peer, Y .

NUCLEIC ACIDS RESEARCH, 2004, 32 :D101-D103

[75] Empirical analysis of transcriptional activity in the Arabidopsis genome [J].

Yamada, K ;

Lim, J ;

Dale, JM ;

Chen, HM ;

Shinn, P ;

Palm, CJ ;

Southwick, AM ;

Wu, HC ;

Kim, C ;

Nguyen, M ;

Pham, P ;

Cheuk, R ;

Karlin-Newmann, G ;

Liu, SX ;

Lam, B ;

Sakano, H ;

Wu, T ;

Yu, GX ;

Miranda, M ;

Quach, HL ;

Tripp, M ;

Chang, CH ;

Lee, JM ;

Toriumi, M ;

Chan, MMH ;

Tang, CC ;

Onodera, CS ;

Deng, JM ;

Akiyama, K ;

Ansari, Y ;

Arakawa, T ;

Banh, J ;

Banno, F ;

Bowser, L ;

Brooks, S ;

Carninci, P ;

Chao, QM ;

Choy, N ;

Enju, A ;

Goldsmith, AD ;

Gurjal, M ;

Hansen, NF ;

Hayashizaki, Y ;

Johnson-Hopson, C ;

Hsuan, VW ;

Iida, K ;

Karnes, M ;

Khan, S ;

Koesema, E ;

Ishida, J .

SCIENCE, 2003, 302 (5646) :842-846

[76] CHARACTERIZATION OF GMENOD40, A GENE SHOWING NOVEL PATTERNS OF CELL-SPECIFIC EXPRESSION DURING SOYBEAN NODULE DEVELOPMENT [J].

YANG, WC ;

KATINAKIS, P ;

HENDRIKS, P ;

SMOLDERS, A ;

DEVRIES, F ;

SPEE, J ;

VANKAMMEN, A ;

BISSELING, T ;

FRANSSEN, H .

PLANT JOURNAL, 1993, 3 (04) :573-585

[77] Cloning and characterization of microRNAs from wheat (Triticum aestivum L.) [J].

Yao, Yingyin ;

Guo, Ganggang ;

Ni, Zhongfu ;

Sunkar, Ramanjulu ;

Du, Jinkun ;

Zhu, Jian-Kang ;

Sun, Qixin .

GENOME BIOLOGY, 2007, 8 (06)

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