Structure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6-A resolution

被引:60
作者
Fritz, G
Roth, A
Schiffer, A
Büchert, T
Bourenkov, G
Bartunik, HD
Huber, H
Stetter, KO
Kroneck, PMH
Ermler, U
机构
[1] Univ Konstanz, Math Naturwissensch Sekt, Fachbereich Biol, D-78457 Constance, Germany
[2] Univ Zurich, Inst Biochem, CH-8057 Zurich, Switzerland
[3] Max Planck Inst Biophys, D-60528 Frankfurt, Germany
[4] Max Planck Arbeitsgrp Strukt Mol Biol, D-22603 Hamburg, Germany
[5] Univ Regensburg, Lehrstuhl Mikrobiol, D-93053 Regensburg, Germany
[6] Univ Regensburg, Archaeenzentrum, D-93053 Regensburg, Germany
关键词
D O I
10.1073/pnas.042664399
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The iron-sulfur flavoenzyme adenylylsulfate (adenosine 5'-phosphosulfate, APS) reductase catalyzes reversibly the reduction of APS to sulfite and AMP. The structures of APS reductase from the hyperthermophilic Archaeoglobus fulgidus in the two-electron reduced state and with sulfite bound to FAD are reported at 1.6- and 2.5-Angstrom resolution, respectively. The FAD-sulfite adduct was detected after soaking the crystals with APS. This finding and the architecture of the active site strongly suggest that catalysis involves a nucleophilic attack of the N5 atom of reduced FAD on the sulfur atom of APS. In view of the high degree of similarity between APS reductase and fumarate reductase especially with regard to the FAD-binding a-subunit, it is proposed that both subunits originate from a common ancestor resembling archaeal APS reductase. The two electrons required for APS reduction are transferred via two [4Fe-4S] clusters from the surface of the protein to FAD. The exceptionally large difference in reduction potential of these clusters (-60 and -500 mV) can be explained by interactions of the clusters with the protein matrix.
引用
收藏
页码:1836 / 1841
页数:6
相关论文
共 38 条
[1]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[2]  
Bamford V, 1999, NAT STRUCT BIOL, V6, P1104
[3]   Alteration of the reduction potential of the [4Fe-4S]2+/+ cluster of Azotobacter vinelandii ferredoxin I [J].
Chen, KS ;
Tilley, GJ ;
Sridhar, V ;
Prasad, GS ;
Stout, CD ;
Armstrong, FA ;
Burgess, BK .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (51) :36479-36487
[4]   Atomic resolution (0.94 Å) structure of Clostridium acidurici ferredoxin.: Detailed geometry of [4Fe-4S] clusters in a protein [J].
Dauter, Z ;
Wilson, KS ;
Sieker, LC ;
Meyer, J ;
Moulis, JM .
BIOCHEMISTRY, 1997, 36 (51) :16065-16073
[5]   THE PHOTOSYNTHETIC REACTION CENTER FROM THE PURPLE BACTERIUM RHODOPSEUDOMONAS-VIRIDIS [J].
DEISENHOFER, J ;
MICHEL, H .
EMBO JOURNAL, 1989, 8 (08) :2149-2170
[6]   Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods [J].
delaFortelle, E ;
Bricogne, G .
MACROMOLECULAR CRYSTALLOGRAPHY, PT A, 1997, 276 :472-494
[7]   Alteration of the midpoint potential and catalytic activity of the Rieske iron-sulfur protein by changes of amino acids forming hydrogen bonds to the iron-sulfur cluster [J].
Denke, E ;
Merbitz-Zahradnik, T ;
Hatzfeld, OM ;
Snyder, CH ;
Link, TA ;
Trumpower, BL .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (15) :9085-9093
[8]   CONFORMATIONS AND ELECTRONIC-STRUCTURES OF OXIDIZED AND REDUCED ISOALLOXAZINE [J].
DIXON, DA ;
LINDNER, DL ;
BRANCHAUD, B ;
LIPSCOMB, WN .
BIOCHEMISTRY, 1979, 18 (26) :5770-5775
[9]  
Dutton P L, 1978, Methods Enzymol, V54, P411
[10]   An extensively modified version of MolScript that includes greatly enhanced coloring capabilities [J].
Esnouf, RM .
JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 1997, 15 (02) :132-+