NMR in drug discovery: A practical guide to identification and validation of ligands interacting with biological macromolecules

被引:150
作者
Gossert, Alvar D. [1 ]
Jahnke, Wolfgang [1 ]
机构
[1] Novartis Inst BioMed Res, Novartis Campus, CH-4002 Basel, Switzerland
关键词
Drug discovery; Validation; Fragment-based screening; Protein-ligand Interactions; NUCLEAR-MAGNETIC-RESONANCE; CROSS-CORRELATED RELAXATION; TARGET RESIDENCE TIME; CORRELATION SPECTRA; BIOMOLECULAR NMR; HMQC EXPERIMENTS; BINDING-SITES; PROTEINS; FRAGMENT; SPECTROSCOPY;
D O I
10.1016/j.pnmrs.2016.09.001
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070305 [高分子化学与物理];
摘要
Protein-ligand interactions are at the heart of drug discovery research. NMR spectroscopy is an excellent technology to identify and validate protein-ligand interactions. A plethora of NMR methods are available which are powerful, robust and information-rich, but also have pitfalls and limitations. In this review, we will focus on how to choose between different experiments, and assess their strengths and liabilities. We introduce the concept of the validation cross, which helps to categorize experiments according to their information content and to simplify the choice of the right experiment in order to address a specific question. Additionally, we will provide the framework for drawing correct conclusions from experimental results in order to accurately evaluate such interactions. Out of scope for this review are methods for subsequent characterization of the interaction such as quantitative KD determination, binding mode analysis, or structure determination. (C) 2016 Elsevier B.V. All rights reserved.
引用
收藏
页码:82 / 125
页数:44
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