Germline mutations of regulator of telomere elongation helicase 1, RTEL1, in Dyskeratosis congenita

被引:168
作者
Ballew, Bari J. [1 ]
Yeager, Meredith [2 ]
Jacobs, Kevin [2 ]
Giri, Neelam [1 ]
Boland, Joseph [2 ]
Burdett, Laurie [2 ]
Alter, Blanche P. [1 ]
Savage, Sharon A. [1 ]
机构
[1] NCI, Clin Genet Branch, Div Canc Epidemiol & Genet, Rockville, MD 20892 USA
[2] NCI, Canc Genom Res Lab, SAIC Frederick Inc, Frederick, MD 20877 USA
基金
美国国家卫生研究院;
关键词
VARIANTS; CANCER; LENGTH; ANTICIPATION; COFFEE;
D O I
10.1007/s00439-013-1265-8
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Dyskeratosis congenita (DC) is an inherited bone marrow failure and cancer predisposition syndrome caused by aberrant telomere biology. The classic triad of dysplastic nails, abnormal skin pigmentation, and oral leukoplakia is diagnostic of DC, but substantial clinical heterogeneity exists; the clinically severe variant Hoyeraal Hreidarsson syndrome (HH) also includes cerebellar hypoplasia, severe immunodeficiency, enteropathy, and intrauterine growth retardation. Germline mutations in telomere biology genes account for approximately one-half of known DC families. Using exome sequencing, we identified mutations in RTEL1, a helicase with critical telomeric functions, in two families with HH. In the first family, two siblings with HH and very short telomeres inherited a premature stop codon from their mother who has short telomeres. The proband from the second family has HH and inherited a premature stop codon in RTEL1 from his father and a missense mutation from his mother, who also has short telomeres. In addition, inheritance of only the missense mutation led to very short telomeres in the proband's brother. Targeted sequencing identified a different RTEL1 missense mutation in one additional DC proband who has bone marrow failure and short telomeres. Both missense mutations affect the helicase domain of RTEL1, and three in silico prediction algorithms suggest that they are likely deleterious. The nonsense mutations both cause truncation of the RTEL1 protein, resulting in loss of the PIP box; this may abrogate an important protein-protein interaction. These findings implicate a new telomere biology gene, RTEL1, in the etiology of DC.
引用
收藏
页码:473 / 480
页数:8
相关论文
共 36 条
[1]   A method and server for predicting damaging missense mutations [J].
Adzhubei, Ivan A. ;
Schmidt, Steffen ;
Peshkin, Leonid ;
Ramensky, Vasily E. ;
Gerasimova, Anna ;
Bork, Peer ;
Kondrashov, Alexey S. ;
Sunyaev, Shamil R. .
NATURE METHODS, 2010, 7 (04) :248-249
[2]   Telomere length is associated with disease severity and declines with age in dyskeratosis congenita [J].
Alter, Blanche P. ;
Rosenberg, Philip S. ;
Giri, Neelam ;
Baerlocher, Gabriela M. ;
Lansdorp, Peter M. ;
Savage, Sharon A. .
HAEMATOLOGICA-THE HEMATOLOGY JOURNAL, 2012, 97 (03) :353-359
[3]   Malignancies and survival patterns in the National Cancer Institute inherited bone marrow failure syndromes cohort study [J].
Alter, Blanche P. ;
Giri, Neelam ;
Savage, Sharon A. ;
Peters, June A. ;
Loud, Jennifer T. ;
Leathwood, Lisa ;
Carr, Ann G. ;
Greene, Mark H. ;
Rosenberg, Philip S. .
BRITISH JOURNAL OF HAEMATOLOGY, 2010, 150 (02) :179-188
[4]   Cancer in dyskeratosis congenita [J].
Alter, Blanche P. ;
Giri, Neelam ;
Savage, Sharon A. ;
Rosenberg, Philip S. .
BLOOD, 2009, 113 (26) :6549-6557
[5]   A map of human genome variation from population-scale sequencing [J].
Altshuler, David ;
Durbin, Richard M. ;
Abecasis, Goncalo R. ;
Bentley, David R. ;
Chakravarti, Aravinda ;
Clark, Andrew G. ;
Collins, Francis S. ;
De la Vega, Francisco M. ;
Donnelly, Peter ;
Egholm, Michael ;
Flicek, Paul ;
Gabriel, Stacey B. ;
Gibbs, Richard A. ;
Knoppers, Bartha M. ;
Lander, Eric S. ;
Lehrach, Hans ;
Mardis, Elaine R. ;
McVean, Gil A. ;
Nickerson, DebbieA. ;
Peltonen, Leena ;
Schafer, Alan J. ;
Sherry, Stephen T. ;
Wang, Jun ;
Wilson, Richard K. ;
Gibbs, Richard A. ;
Deiros, David ;
Metzker, Mike ;
Muzny, Donna ;
Reid, Jeff ;
Wheeler, David ;
Wang, Jun ;
Li, Jingxiang ;
Jian, Min ;
Li, Guoqing ;
Li, Ruiqiang ;
Liang, Huiqing ;
Tian, Geng ;
Wang, Bo ;
Wang, Jian ;
Wang, Wei ;
Yang, Huanming ;
Zhang, Xiuqing ;
Zheng, Huisong ;
Lander, Eric S. ;
Altshuler, David L. ;
Ambrogio, Lauren ;
Bloom, Toby ;
Cibulskis, Kristian ;
Fennell, Tim J. ;
Gabriel, Stacey B. .
NATURE, 2010, 467 (7319) :1061-1073
[6]   Haploinsufficiency of telomerase reverse transcriptase leads to anticipation in autosomal dominant dyskeratosis congenita [J].
Armanios, M ;
Chen, JL ;
Chang, YPC ;
Brodsky, RA ;
Hawkins, A ;
Griffin, CA ;
Eshleman, JR ;
Cohen, AR ;
Chakravarti, A ;
Hamosh, A ;
Greider, CW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (44) :15960-15964
[7]   Flow cytometry and FISH to measure the average length of telomeres (flow FISH) [J].
Baerlocher, Gabriela M. ;
Vulto, Irma ;
de Jong, Gary ;
Lansdorp, Peter M. .
NATURE PROTOCOLS, 2006, 1 (05) :2365-2376
[8]   ProPhylER: A curated online resource for protein function and structure based on evolutionary constraint analyses [J].
Binkley, Jonathan ;
Karra, Kalpana ;
Kirby, Andrew ;
Hosobuchi, Midori ;
Stone, Eric A. ;
Sidow, Arend .
GENOME RESEARCH, 2010, 20 (01) :142-154
[9]   A framework for variation discovery and genotyping using next-generation DNA sequencing data [J].
DePristo, Mark A. ;
Banks, Eric ;
Poplin, Ryan ;
Garimella, Kiran V. ;
Maguire, Jared R. ;
Hartl, Christopher ;
Philippakis, Anthony A. ;
del Angel, Guillermo ;
Rivas, Manuel A. ;
Hanna, Matt ;
McKenna, Aaron ;
Fennell, Tim J. ;
Kernytsky, Andrew M. ;
Sivachenko, Andrey Y. ;
Cibulskis, Kristian ;
Gabriel, Stacey B. ;
Altshuler, David ;
Daly, Mark J. .
NATURE GENETICS, 2011, 43 (05) :491-+
[10]   Regulation of murine telomere length by Rtel:: An essential gene encoding a helicase-like protein [J].
Ding, H ;
Schertzer, M ;
Wu, XL ;
Gertsenstein, M ;
Selig, S ;
Kammori, M ;
Pourvali, R ;
Poon, S ;
Vulto, I ;
Chavez, E ;
Tam, PPL ;
Nagy, A ;
Lansdorp, PM .
CELL, 2004, 117 (07) :873-886