An automated approach for clustering an ensemble of NMR-derived protein structures into conformationally related subfamilies

被引：432

作者：

Kelley, LA

Gardner, SP

Sutcliffe, MJ

机构：

[1] UNIV LEICESTER,DEPT CHEM,LEICESTER LE1 7RH,LEICS,ENGLAND

[2] OXFORD MOL LTD,MEDAWAR CTR,OXFORD OX4 4GA,ENGLAND

来源：

PROTEIN ENGINEERING | 1996年 / 9卷 / 11期

基金：

英国生物技术与生命科学研究理事会;

关键词：

automated clustering; cluster analysis; multiple conformations; NMR spectroscopy; protein structure;

D O I：

10.1093/protein/9.11.1063

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

[No abstract available]

引用

页码：1063 / 1065

页数：3

共 11 条

[1] ABOLA EE, 1987, CRYSTALLOGRAPHIC DAT, P107
[2] AN APPROACH TO PROTEIN HOMOLOGY MODELING BASED ON AN ENSEMBLE OF NMR STRUCTURES - APPLICATION TO THE SOX-5 HMG-BOX PROTEIN
ADZHUBEI, AA
LAUGHTON, CA
NEIDLE, S
[J]. PROTEIN ENGINEERING, 1995, 8 (07): : 615 - 625
[3] AUTOMATED CONFORMATIONAL-ANALYSIS FROM CRYSTALLOGRAPHIC DATA .2. SYMMETRY-MODIFIED JARVIS-PATRICK AND COMPLETE-LINKAGE CLUSTERING ALGORITHMS FOR 3-DIMENSIONAL PATTERN-RECOGNITION
ALLEN, FH
DOYLE, MJ
TAYLOR, R
[J]. ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1991, 47 : 41 - 49
[4] COMPARISON OF PROTEIN STRUCTURES DETERMINED BY NMR IN SOLUTION AND BY X-RAY-DIFFRACTION IN SINGLE-CRYSTALS
BILLETER, M
[J]. QUARTERLY REVIEWS OF BIOPHYSICS, 1992, 25 (03) : 325 - 377
[5] COORDINATE-BASED CLUSTER-ANALYSIS
DIAMOND, R
[J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1995, 51 : 127 - 135
[6] SOLUTION STRUCTURE OF RECOMBINANT HIRUDIN AND THE LYS-47-]GLU MUTANT - A NUCLEAR MAGNETIC-RESONANCE AND HYBRID DISTANCE GEOMETRY DYNAMICAL SIMULATED ANNEALING STUDY
FOLKERS, PJM
CLORE, GM
DRISCOLL, PC
DODT, J
KOHLER, S
GRONENBORN, AM
[J]. BIOCHEMISTRY, 1989, 28 (06) : 2601 - 2617
[7] GUNTERT P, 1995, PROTEIN SCI, V4, P84
[8] PROCHECK - A PROGRAM TO CHECK THE STEREOCHEMICAL QUALITY OF PROTEIN STRUCTURES
LASKOWSKI, RA
MACARTHUR, MW
MOSS, DS
THORNTON, JM
[J]. JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1993, 26 : 283 - 291
[9] RAPID COMPARISON OF PROTEIN STRUCTURES
MCLACHLAN, AD
[J]. ACTA CRYSTALLOGRAPHICA SECTION A, 1982, 38 (NOV): : 871 - 873
[10] A model for human cytochrome P-450 2D6 based on homology modeling and NMR studies of substrate binding
Modi, S
Paine, MJ
Sutcliffe, MJ
Lian, LY
Primrose, WU
Wolf, CR
Roberts, GCK
[J]. BIOCHEMISTRY, 1996, 35 (14) : 4540 - 4550

← 1 2 →