Conformational analysis of maltoside heteroanalogues using high-quality NOE data and molecular mechanics calculations. Flexibility as a function of the interglycosidic chalcogen atom

被引:30
作者
Weimar, T
Kreis, UC
Andrews, JS
Pinto, BM [1 ]
机构
[1] Simon Fraser Univ, Dept Chem, Burnaby, BC V5A 1S6, Canada
[2] Univ Lubeck, Inst Chem, D-23538 Lubeck, Germany
基金
加拿大自然科学与工程研究理事会;
关键词
molecular mechanics calculations; Nuclear Overhauser Enhancement; maltose heteroanalogues; conformational analysis; flexibility of glycosidic linkages; glucosidase inhibitors;
D O I
10.1016/S0008-6215(99)00011-7
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The conformational analysis of three maltoside heteroanalogues containing sulfur in the nonreducing ring and either oxygen 1, sulfur 2 or selenium 3 atoms in the interglycosidic linkage is performed using high-quality NOE data for 1-3 and molecular mechanics calculations using the program PIMM91 for the derivatives 1 and 2. The compounds are substrate analogues of glucosidases and inhibit glucoamylase 2. Theoretical NOE data, obtained from Boltzmann averaging of potential energy maps from a grid search, are compared with the experimental data. The gross conformational features of all three compounds are similar in that they populate mainly two conformational regions of the potential energy maps. These two regions are equivalent to the ones found for maltose and interconvert through a rotation of the dihedral angle Psi from similar to - 30 degrees to similar to 180 degrees. Experimental NOE data and theoretical energy differences and population distributions show that the substitution of oxygen with sulfur or selenium results in an increase in the flexibility of the interglycosidic linkage in the latter compounds. Thus, the population of the conformational family with a dihedral angle Psi of similar to 180 degrees increases from similar to 1% (1) to similar to 10% (2). (C) 1999 Elsevier Science Ltd. All rights reserved.
引用
收藏
页码:222 / 233
页数:12
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