Lipidomics reveals dramatic lipid compositional changes in the maturing postnatal lung

被引:67
作者
Dautel, Sydney E. [1 ]
Kyle, Jennifer E. [1 ]
Clair, Geremy [1 ]
Sontag, Ryan L. [1 ]
Weitz, Karl K. [1 ]
Shukla, Anil K. [1 ]
Nguyen, Son N. [2 ]
Kim, Young-Mo [1 ]
Zink, Erika M. [1 ]
Luders, Teresa [1 ]
Frevert, Charles W. [3 ]
Gharib, Sina A. [3 ]
Laskin, Julia [2 ]
Carson, James P. [4 ]
Metz, Thomas O. [1 ]
Corley, Richard A. [1 ]
Ansong, Charles [1 ]
机构
[1] Pacific Northwest Natl Lab, Biol Sci Div, Richland, WA 99352 USA
[2] Pacific Northwest Natl Lab, Phys Sci Div, Richland, WA USA
[3] Univ Washington, Ctr Lung Biol, Seattle, WA 98195 USA
[4] Univ Texas Austin, Texas Adv Comp Ctr, Austin, TX 78758 USA
关键词
LYSOPHOSPHATIDYLCHOLINE; APOPTOSIS; SPHINGOLIPIDS; METABOLISM; RECEPTORS; SYSTEMS; PROTEIN; PLASMALOGENS; ENZYMES; HEALTH;
D O I
10.1038/srep40555
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
070301 [无机化学]; 070403 [天体物理学]; 070507 [自然资源与国土空间规划学]; 090105 [作物生产系统与生态工程];
摘要
Lung immaturity is a major cause of morbidity and mortality in premature infants. Understanding the molecular mechanisms driving normal lung development could provide insights on how to ameliorate disrupted development. While transcriptomic and proteomic analyses of normal lung development have been previously reported, characterization of changes in the lipidome is lacking. Lipids play significant roles in the lung, such as dipalmitoylphosphatidylcholine in pulmonary surfactant; however, many of the roles of specific lipid species in normal lung development, as well as in disease states, are not well defined. In this study, we used liquid chromatography-mass spectrometry (LC-MS/MS) to investigate the murine lipidome during normal postnatal lung development. Lipidomics analysis of lungs from post-natal day 7, day 14 and 6-8 week mice (adult) identified 924 unique lipids across 21 lipid subclasses, with dramatic alterations in the lipidome across developmental stages. Our data confirmed previously recognized aspects of post- natal lung development and revealed several insights, including in sphingolipid-mediated apoptosis, inflammation and energy storage/usage. Complementary proteomics, metabolomics and chemical imaging corroborated these observations. This multi-omic view provides a unique resource and deeper insight into normal pulmonary development.
引用
收藏
页数:12
相关论文
共 70 条
[1]
Sphingosine 1-phosphate-induced cell proliferation, survival, and related signaling events mediated by G protein-coupled receptors Edg3 and Edg5 [J].
An, SZ ;
Zheng, YH ;
Bleu, T .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (01) :288-296
[2]
[Anonymous], 2016, MSYSTEMS
[3]
[Anonymous], BIOCH J
[4]
LYSOPHOSPHATIDYLCHOLINE AS A POSSIBLE 2ND MESSENGER SYNERGISTIC TO DIACYLGLYCEROL AND CALCIUM-ION FOR LYMPHOCYTE-T ACTIVATION [J].
ASAOKA, Y ;
OKA, M ;
YOSHIDA, K ;
NISHIZUKA, Y .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1991, 178 (03) :1378-1385
[5]
ACTIVITIES OF ENZYMES OF KETONE-BODY METABOLISM IN LIVER AND MUSCLE TISSUES OF SUCKLING RABBITS [J].
BEIS, A .
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY, 1985, 81 (01) :245-249
[6]
Systems biology approaches to identify developmental bases for lung diseases [J].
Bhattacharya, Soumyaroop ;
Mariani, Thomas J. .
PEDIATRIC RESEARCH, 2013, 73 (04) :514-522
[7]
Functions of plasmalogen lipids in health and disease [J].
Braverman, Nancy E. ;
Moser, Ann B. .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE, 2012, 1822 (09) :1442-1452
[8]
Lung fibroblasts undergo apoptosis following alveolarization [J].
Bruce, MC ;
Honaker, CE ;
Cross, RJ .
AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY, 1999, 20 (02) :228-236
[9]
Comprehensive analysis of lipids in biological systems by liquid chromatography-mass spectrometry [J].
Cajka, Tomas ;
Fiehn, Oliver .
TRAC-TRENDS IN ANALYTICAL CHEMISTRY, 2014, 61 :192-206
[10]
Omega-3 Fatty Acids and Inflammatory Processes [J].
Calder, Philip C. .
NUTRIENTS, 2010, 2 (03) :355-374