A coproofreading Zn2+-dependent exonuclease within a bacterial replicase

被引:40
作者
Stano, NM [1 ]
Chen, J [1 ]
McHenry, CS [1 ]
机构
[1] Univ Colorado, Hlth Sci Ctr, Dept Biochem & Mol Biol, Denver, CO 80262 USA
关键词
D O I
10.1038/nsmb1078
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The proofreading exonucleases of all DNA replicases contain acidic residues that chelate two Mg2+ ions that participate in catalysis. DNA polymerase III holoenzymes contain their proofreading activity in a separate subunit, epsilon, which binds the polymerase subunit, alpha, through alpha's N-terminal php domain. Here we demonstrate that the a php domain contains a novel Zn2+-dependent 3'-> 5' exonuclease that preferentially removes mispaired nucleotides, providing the first example of a coediting nuclease.
引用
收藏
页码:458 / 459
页数:2
相关论文
共 10 条
[1]   Phosphoesterase domains associated with DNA polymerases of diverse origins [J].
Aravind, L ;
Koonin, EV .
NUCLEIC ACIDS RESEARCH, 1998, 26 (16) :3746-3752
[2]   STRUCTURAL BASIS FOR THE 3'-5' EXONUCLEASE ACTIVITY OF ESCHERICHIA-COLI DNA-POLYMERASE-I - A 2 METAL-ION MECHANISM [J].
BEESE, LS ;
STEITZ, TA .
EMBO JOURNAL, 1991, 10 (01) :25-33
[3]  
BRUTLAG D, 1972, J BIOL CHEM, V247, P241
[4]  
COX EC, 1982, GENETICS, V100, P7
[5]   Characterization of two DNA polymerases from the hyperthermophilic euryarchaeon Pyrococcus abyssi [J].
Gueguen, Y ;
Rolland, JL ;
Lecompte, O ;
Azam, P ;
Le Romancer, G ;
Flament, D ;
Raffin, JP ;
Dietrich, J .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 2001, 268 (22) :5961-5969
[6]   Structural biochemistry and interaction architecture of the DNA double-strand break repair Mre11 nuclease and Rad50-ATPase [J].
Hopfner, KP ;
Karcher, A ;
Craig, L ;
Woo, TT ;
Carney, JP ;
Tainer, JA .
CELL, 2001, 105 (04) :473-485
[7]   In vivo assembly of overproduced DNA polymerase III - Overproduction, purification, and characterization of the alpha, alpha-epsilon, and alpha-epsilon-theta subunits [J].
Kim, DR ;
McHenry, CS .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1996, 271 (34) :20681-20689
[8]   IDENTIFICATION OF THE EPSILON-SUBUNIT OF ESCHERICHIA-COLI DNA POLYMERASE-III HOLOENZYME AS THE DNAQ GENE-PRODUCT - A FIDELITY SUBUNIT FOR DNA-REPLICATION [J].
SCHEUERMANN, R ;
TAM, S ;
BURGERS, PMJ ;
LU, C ;
ECHOLS, H .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1983, 80 (23) :7085-7089
[9]   Crystal structure of the Escherichia coli YcdX protein reveals a trinuclear zinc active site [J].
Teplyakov, A ;
Obmolova, G ;
Khil, PP ;
Howard, AJ ;
Camerini-Otero, RD ;
Gilliland, GL .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2003, 51 (02) :315-318
[10]  
WIECZOREK A, 2006, J BIOL CHEM