Birth and evolutionary history of a human minisatellite

被引:8
作者
Boán, F [1 ]
Blanco, MG [1 ]
Quinteiro, J [1 ]
Mouriño, S [1 ]
Gómez-Márquez, J [1 ]
机构
[1] Univ Santiago, Fac Biol, Dept Bioquim & Biol Mol, Galicia, Spain
关键词
minisatellite evolution; phylogenetic footprint; primates; human minisatellite MsH42;
D O I
10.1093/molbev/msh007
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
One of the most exciting challenges in human biology is the understanding of how our genome was constructed during evolution. Here we explore the evolutionary history of the low polymorphic human minisatellite MsH42 and its flanking sequences. We show that the evolutionary birth of MsH42 took place within an intron, early in primate lineage evolution, more than 40 MYA. Then, single base-pair changes and duplications/deletions of repeat blocks by mispairing were probably the main forces governing the generation of this minisatellite and its polymorphism throughout primate evolution. Moreover, we detected several phylogenetic footprints at both sides of MsH42. We believe that our findings will contribute to the understanding of low-variability minisatellite evolution.
引用
收藏
页码:228 / 235
页数:8
相关论文
共 27 条
[1]   Ph gene evolution in primates: Study of intron sequences [J].
Apoil, PA ;
Blancher, A .
MOLECULAR BIOLOGY AND EVOLUTION, 2000, 17 (01) :127-136
[2]   Molecular characterization of a new human minisatellite that is able to form single-stranded loops in vitro and is recognized by nuclear proteins [J].
Boan, F ;
Gonzalez, AI ;
Rodriguez, JM ;
GomezMarquez, J .
FEBS LETTERS, 1997, 418 (03) :251-257
[3]   Recombination analysis of the human minisatellite MsH42 suggests the existence of two distinct pathways for initiation and resolution of recombination at MsH42 in rat testes nuclear extracts [J].
Boán, F ;
Rodríguez, JM ;
Mouriño, S ;
Blanco, MG ;
Viñas, A ;
Sánchez, L ;
Gómez-Márquez, J .
BIOCHEMISTRY, 2002, 41 (07) :2166-2176
[4]   A non-hypervariable human minisatellite strongly stimulates in vitro intramolecular homologous recombination [J].
Boán, F ;
Rodríguez, JM ;
Gómez-Márquez, J .
JOURNAL OF MOLECULAR BIOLOGY, 1998, 278 (03) :499-505
[5]   Phylogenetic shadowing of primate sequences to find functional regions of the human genome [J].
Boffelli, D ;
McAuliffe, J ;
Ovcharenko, D ;
Lewis, KD ;
Ovcharenko, I ;
Pachter, L ;
Rubin, EM .
SCIENCE, 2003, 299 (5611) :1391-1394
[6]   THE EVOLUTIONARY DYNAMICS OF REPETITIVE DNA IN EUKARYOTES [J].
CHARLESWORTH, B ;
SNIEGOWSKI, P ;
STEPHAN, W .
NATURE, 1994, 371 (6494) :215-220
[7]   The genomic record of humankind's evolutionary roots [J].
Goodman, M .
AMERICAN JOURNAL OF HUMAN GENETICS, 1999, 64 (01) :31-39
[8]   EVOLUTIONARY TRANSIENCE OF HYPERVARIABLE MINISATELLITES IN MAN AND THE PRIMATES [J].
GRAY, IC ;
JEFFREYS, AJ .
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 1991, 243 (1308) :241-253
[9]   PHYLOGENETIC FOOTPRINTING REVEALS A NUCLEAR-PROTEIN WHICH BINDS TO SILENCER SEQUENCES IN THE HUMAN-GAMMA AND HUMAN-EPSILON GLOBIN GENES [J].
GUMUCIO, DL ;
HEILSTEDTWILLIAMSON, H ;
GRAY, TA ;
TARLE, SA ;
SHELTON, D ;
TAGLE, DA ;
SLIGHTOM, JL ;
GOODMAN, M ;
COLLINS, FS .
MOLECULAR AND CELLULAR BIOLOGY, 1992, 12 (11) :4919-4929
[10]   Minisatellite origins in yeast and humans [J].
Haber, JE ;
Louis, EJ .
GENOMICS, 1998, 48 (01) :132-135