A SIMPLE MODEL EXPLAINS THE DYNAMICS OF PREFERENTIAL HOST SWITCHING AMONG MAMMAL RNA VIRUSES

被引:20
作者
Cuthill, Jennifer Hoyal [1 ]
Charleston, Michael A. [1 ]
机构
[1] Univ Sydney, Sch Informat Technol, Sydney, NSW 2006, Australia
基金
澳大利亚研究理事会;
关键词
Coevolution; parasitism; phylogenetics; EVOLUTIONARY HISTORY; ONLINE RESOURCE; PARASITE; EMERGENCE; MEASLES; SPECIFICITY; INFECTION; INSECT; ORIGIN; RANGE;
D O I
10.1111/evo.12064
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
A growing number of studies support a tendency toward preferential host switching, by parasites and pathogens, over relatively short phylogenetic distances. This suggests that a host switch is more probable if a potential host is closely related to the original host than if it is a more distant relative. However, despite its importance for the health of humans, livestock, and wildlife, the detailed dynamics of preferential host switching have, so far, been little studied. We present an empirical test of two theoretical models of preferential host switching, using observed phylogenetic distributions of host species for RNA viruses of three mammal orders (primates, carnivores, and ungulates). The analysis focuses on multihost RNA virus species, because their presence on multiple hosts and their estimated ages of origin indicate recent host switching. Approximate Bayesian computation was used to compare observed phylogenetic distances between hosts with those simulated under the theoretical models. The results support a decreasing sigmoidal model of preferential host switching, with a strong effect from increasing phylogenetic distance, on all three studied host phylogenies. This suggests that the dynamics of host switching are fundamentally similar for RNA viruses of different mammal orders and, potentially, a wider range of coevolutionary systems.
引用
收藏
页码:980 / 990
页数:11
相关论文
共 90 条
[31]   Full genomic analysis of a simian SA11-like G3P[2] rotavirus strain isolated from an asymptomatic infant: Identification of novel VP1, VP6 and NSP4 genotypes [J].
Ghosh, Souvik ;
Gatheru, Zipporah ;
Nyangao, James ;
Adachi, Noriaki ;
Urushibara, Noriko ;
Kobayashi, Nobumichi .
INFECTION GENETICS AND EVOLUTION, 2011, 11 (01) :57-63
[32]   Evolution and distribution of class II-related endogenous retroviruses [J].
Gifford, R ;
Kabat, P ;
Martin, J ;
Lynch, C ;
Tristem, M .
JOURNAL OF VIROLOGY, 2005, 79 (10) :6478-6486
[33]  
Gorbalenya AE, 2008, NIDOVIRUSES, P15
[34]   Understanding the alphaviruses: Recent research on important emerging pathogens and progress towards their control [J].
Gould, E. A. ;
Coutard, B. ;
Malet, H. ;
Morin, B. ;
Jamal, S. ;
Weaver, S. ;
Gorbalenya, A. ;
Moureau, G. ;
Baronti, C. ;
Delogu, I. ;
Forrester, N. ;
Khasnatinov, M. ;
Gritsun, T. ;
de Lamballerie, X. ;
Canard, B. .
ANTIVIRAL RESEARCH, 2010, 87 (02) :111-124
[35]   Emergence of Divergent Zaire Ebola Virus Strains in Democratic Republic of the Congo in 2007 and 2008 [J].
Grard, Gilda ;
Biek, Roman ;
Tamfum, Jean-Jacques Muyembe ;
Fair, Joseph ;
Wolfe, Nathan ;
Formenty, Pierre ;
Paweska, Janusz ;
Leroy, Eric .
JOURNAL OF INFECTIOUS DISEASES, 2011, 204 :S776-S784
[36]   Genetic Characterization of Zika Virus Strains: Geographic Expansion of the Asian Lineage [J].
Haddow, Andrew D. ;
Schuh, Amy J. ;
Yasuda, Chadwick Y. ;
Kasper, Matthew R. ;
Heang, Vireak ;
Huy, Rekol ;
Guzman, Hilda ;
Tesh, Robert B. ;
Weaver, Scott C. .
PLOS NEGLECTED TROPICAL DISEASES, 2012, 6 (02)
[37]   The matrix protein gene sequence analysis reveals close relationship between peste des petits ruminants virus (PPRV) and dolphin morbillivirus [J].
Haffar, A ;
Libeau, G ;
Moussa, A ;
Cécile, M ;
Diallo, A .
VIRUS RESEARCH, 1999, 64 (01) :69-75
[38]   Canine distemper virus - A morbillivirus in search of new hosts? [J].
Harder, TC ;
Osterhaus, ADME .
TRENDS IN MICROBIOLOGY, 1997, 5 (03) :120-124
[39]   Viral evolution and the emergence of SARS coronavirus [J].
Holmes, EC ;
Rambaut, A .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2004, 359 (1447) :1059-1065
[40]   Molecular clocks and the puzzle of RNA virus origins [J].
Holmes, EC .
JOURNAL OF VIROLOGY, 2003, 77 (07) :3893-3897