First crystal structure of rubisco from a green alga, Chlamydomonas reinhardtii

被引:83
作者
Taylor, TC
Backlund, A
Bjorhall, K
Spreitzer, RJ
Andersson, I
机构
[1] Swedish Univ Agr Sci, Dept Mol Biol, S-75124 Uppsala, Sweden
[2] Univ Uppsala, Dept Med Chem, Div Pharmacognosy, S-75123 Uppsala, Sweden
[3] Univ Nebraska, Dept Biochem, Lincoln, NE 68588 USA
关键词
D O I
10.1074/jbc.M107765200
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of Rubisco (ribulose 1,5-bisphosphate carboxylase/oxygenase) from the unicellular green alga, Chlamydomonas reinhardtii has been determined to 1.4 Angstrom resolution. Overall, the structure shows high similarity to the previously determined structures of L8S8 Rubisco enzymes. The largest difference is found in the loop between beta strands A and B of the small subunit (betaA-betaB loop), which is longer by six amino acid residues than the corresponding region in Rubisco from Spinacia. Mutations of residues in the betaA-betaB loop have been shown to affect holoenzyme stability and catalytic properties. The information contained in the Chlamydomonas structure enables a more reliable analysis of the effect of these mutations. No electron density was observed for the last 13 residues of the small subunit, which are assumed to be disordered in the crystal. Because of the high resolution of the data, some posttranslational modifications are unambiguously apparent in the structure. These include cysteine and N-terminal methylations and proline 4-hydroxylations.
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页码:48159 / 48164
页数:6
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共 43 条
[21]   REGULATION OF SOYBEAN NET PHOTOSYNTHETIC CO2 FIXATION BY INTERACTION OF CO2, O2, AND RIBULOSE 1,5-DIPHOSPHATE CARBOXYLASE [J].
LAING, WA ;
OGREN, WL ;
HAGEMAN, RH .
PLANT PHYSIOLOGY, 1974, 54 (05) :678-685
[22]   Specificity for activase is changed by a Pro-89 to Arg substitution in the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase [J].
Larson, EM ;
OBrien, CM ;
Zhu, GH ;
Spreitzer, RJ ;
Portis, AR .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1997, 272 (27) :17033-17037
[23]   Raster3D: Photorealistic molecular graphics [J].
Merritt, EA ;
Bacon, DJ .
MACROMOLECULAR CRYSTALLOGRAPHY, PT B, 1997, 277 :505-524
[24]   Refinement of macromolecular structures by the maximum-likelihood method [J].
Murshudov, GN ;
Vagin, AA ;
Dodson, EJ .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1997, 53 :240-255
[25]   AMoRe: An automated molecular replacement program package [J].
Navaza, J ;
Saludjian, P .
MACROMOLECULAR CRYSTALLOGRAPHY, PT A, 1997, 276 :581-594
[26]   STRUCTURE DETERMINATION AND REFINEMENT OF RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE FROM SYNECHOCOCCUS PCC6301 [J].
NEWMAN, J ;
BRANDEN, CI ;
JONES, TA .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1993, 49 :548-560
[27]   Activase region on chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase - Nonconservative substitution in the large subunit alters species specificity of protein interaction [J].
Ott, CM ;
Smith, BD ;
Portis, AR ;
Spreitzer, RJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (34) :26241-26244
[28]   Processing of X-ray diffraction data collected in oscillation mode [J].
Otwinowski, Z ;
Minor, W .
MACROMOLECULAR CRYSTALLOGRAPHY, PT A, 1997, 276 :307-326
[29]   wARP: Improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models [J].
Perrakis, A ;
Sixma, TK ;
Wilson, KS ;
Lamzin, VS .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1997, 53 :448-455
[30]   THE REGULATION OF RUBISCO BY RUBISCO ACTIVASE [J].
PORTIS, AR .
JOURNAL OF EXPERIMENTAL BOTANY, 1995, 46 :1285-1291