Water Adsorption at Two Unsolvated Peptides with a Protonated Lysine Residue: From Self-Solvation to Solvation

被引:20
作者
Chutia, Sucismita [1 ]
Rossi, Mariana [1 ]
Blum, Volker [1 ]
机构
[1] Max Planck Gesell, Fritz Haber Inst, Theory Dept, D-14195 Berlin, Germany
关键词
INITIO MOLECULAR-DYNAMICS; DENSITY-FUNCTIONAL THEORY; AROMATIC-AMINO-ACIDS; GAS-PHASE; IN-VACUO; INFRARED-SPECTROSCOPY; AQUEOUS SOLVATION; HELIX FORMATION; HYDRATION; MICROSOLVATION;
D O I
10.1021/jp3098268
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070305 [高分子化学与物理];
摘要
We study the initial steps of the interaction of water molecules with two unsolvated peptides: Ac-Ala(5)-LysH(+) and Ac-Ala(8)-LysH(+). Each peptide has two primary candidate sites for water adsorption near the C-terminus: a protonated carboxyl group and the protonated ammonium group of LysH(+), which is fully hydrogen-bonded (self-solvated) in the absence of water. Earlier experimental studies have shown that H2O adsorbs readily at Ac-Ala(5)-LysH(+) (a non-helical peptide) but with a much lower propensity at Ac-Ala(8)-LysH(+) (a helix) under the same conditions. The helical conformation of Ac-Ala(8)-LysH(+) has been suggested as the origin of the different behavior. We here use first-principles conformational searches (all-electron density functional theory based on a van der Waals corrected version of the PBE functional, PBE+vdW) to study the microsolvation of Ac-Ala(5)-LysH(+) with one to five water molecules and the monohydration of Ac-Ala(8)-LysH(+). In both cases, the most favorable water adsorption sites break intramolecular hydrogen bonds associated with the ammonium group, in contrast to earlier suggestions in the literature. A simple thermodynamic model yields Gibbs free energies Delta G(0) (T) and equilibrium constants in agreement with experiments. A qualitative change of the first adsorption site does not occur. For few water molecules, we do not consider carboxyl deprotonation or finite-temperature dynamics, but in a liquid solvent, both effects would be important. Exploratory ab initio molecular dynamics simulations illustrate the short-time effects of a droplet of 152 water molecules on the initial unsolvated conformation, including the deprotonation of the carboxyl group. The self-solvation of the ammonium group by intramolecular hydrogen bonds is lifted in favor of a solvation by water.
引用
收藏
页码:14788 / 14804
页数:17
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