Autozygome-guided exome sequencing in retinal dystrophy patients reveals pathogenetic mutations and novel candidate disease genes

被引:225
作者
Abu-Safieh, Leen [1 ]
Alrashed, May [1 ,2 ,3 ]
Anazi, Shamsa [1 ]
Alkuraya, Hisham [1 ,4 ]
Khan, Arif O. [5 ]
Al-Owain, Mohammed [6 ,7 ]
Al-Zahrani, Jawahir [1 ]
Al-Abdi, Lama [1 ]
Hashem, Mais [1 ]
Al-Tarimi, Salwa [1 ]
Sebai, Mohammed-Adeeb [1 ]
Shamia, Ahmed [1 ]
Ray-zack, Mohamed D. [1 ]
Nassan, Malik [1 ]
Al-Hassnan, Zuhair N. [6 ,7 ]
Rahbeeni, Zuhair [6 ]
Waheeb, Saad [8 ,9 ]
Alkharashi, Abdullah [10 ]
Abboud, Emad [11 ]
Al-Hazzaa, Selwa A. F. [1 ,12 ,13 ]
Alkuraya, Fowzan S. [1 ,7 ,14 ,15 ]
机构
[1] King Faisal Specialist Hosp & Res Ctr, Dept Genet, Riyadh 11211, Saudi Arabia
[2] UCL Inst Ophthalmol, Dept Genet, London EC1V 9EL, England
[3] King Saud Univ, Coll Appl Med Sci, Dept Clin Lab Sci, Riyadh 11573, Saudi Arabia
[4] Imam Muhammed Bin Saud Islamic Univ, Coll Med, Dept Ophthalmol, Riyadh 13317, Saudi Arabia
[5] King Khalid Eye Specialist Hosp, Dept Pediat, Riyadh 11462, Saudi Arabia
[6] King Faisal Specialist Hosp & Res Ctr, Dept Med Genet, Riyadh 11211, Saudi Arabia
[7] Alfaisal Univ, Coll Med, Dept Anat & Cell Biol, Riyadh 11533, Saudi Arabia
[8] King Faisal Specialist Hosp & Res Ctr, Dept Ophthalmol, Jeddah 21499, Saudi Arabia
[9] King Abdulaziz Univ, Coll Med, Dept Ophthalmol, Jeddah 21352, Saudi Arabia
[10] King Saud Univ, Coll Med, Dept Ophthalmol, Riyadh 11573, Saudi Arabia
[11] King Khalid Eye Specialist Hosp, Dept Retina, Riyadh 11462, Saudi Arabia
[12] King Faisal Specialist Hosp & Res Ctr, Dept Ophthalmol, Riyadh 11211, Saudi Arabia
[13] Alfaisal Univ, Coll Med, Dept Ophthalmol, Riyadh 11533, Saudi Arabia
[14] King Khalid Univ Hosp, Dept Pediat, Riyadh 11573, Saudi Arabia
[15] King Saud Univ, Coll Med, Riyadh 11573, Saudi Arabia
关键词
RETINITIS-PIGMENTOSA; RECESSIVE MUTATIONS; CONE DYSTROPHY; ALPHA-SUBUNIT; HUMAN HOMOLOG; PREVALENCE; GENETICS; HOMOZYGOSITY; FAMILIES; IDENTIFY;
D O I
10.1101/gr.144105.112
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Retinal dystrophy (RD) is a heterogeneous group of hereditary diseases caused by loss of photoreceptor function and contributes significantly to the etiology of blindness globally but especially in the industrialized world. The extreme locus and allelic heterogeneity of these disorders poses a major diagnostic challenge and often impedes the ability to provide a molecular diagnosis that can inform counseling and gene-specific treatment strategies. In a large cohort of nearly 150 RD families, we used genomic approaches in the form of autozygome-guided mutation analysis and exome sequencing to identify the likely causative genetic lesion in the majority of cases. Additionally, our study revealed six novel candidate disease genes (C21orf2, EMC1, KIAA1549, GPR125, ACBD5, and DTHD1), two of which (ACBD5 and DTHD1) were observed in the context of syndromic forms of RD that are described for the first time.
引用
收藏
页码:236 / 247
页数:12
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