Gene expression profiling identifies molecular subgroups among nodal peripheral T-cell lymphomas

被引:90
作者
Ballester, B
Ramuz, O
Gisselbrecht, C
Doucet, G
Loï, L
Loriod, B
Bertucci, F
Bouabdallah, R
Devilard, E
Carbuccia, N
Mozziconacci, MJ
Birnbaum, D
Brousset, P
Berger, F
Salles, G
Briére, J
Houlgatte, R
Gaulard, P
Xerri, L [1 ]
机构
[1] Inst J Paoli I Calmettes, Dept Biopathol, F-13273 Marseille 9, France
[2] INSERM, TAGC, ERM206, Marseille, France
[3] Univ Mediterranee, Marseille, France
[4] CHU St Louis, Dept Hematopathol, Paris, France
[5] Hop St Louis, Inst Hematol, Grp Etud Lymphomes Adulte, F-75010 Paris, France
[6] Inst J Paoli I Calmettes, Dept Mol Oncol, F-13009 Marseille, France
[7] CHU Purpan, Dept Pathol, F-31052 Toulouse, France
[8] CHU Lyon, Dept Pathol, Lyon, France
[9] CHU Lyon, Dept Hematol, Lyon, France
[10] Hop Henri Mondor, Dept Pathol, INSERM U 617, AP HP, F-94010 Creteil, France
关键词
T-cell lymphoma; gene expression profiling; microarray;
D O I
10.1038/sj.onc.1209178
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The classification of peripheral T-cell lymphomas (PTCL) is still a matter of debate. To establish a molecular classification of PTCL, we analysed 59 primary nodal T-cell lymphomas using cDNA microarrays, including 56 PTCL and three T-lymphoblastic lymphoma (T-LBL). The expression profiles could discriminate angioimmunoblastic lymphoma, anaplastic large-cell lymphoma and T-LBL. In contrast, cases belonging to the broad category of 'PTCL, unspecified' (PTCL-U) did not share a single molecular pro. le. Using a multiclass predictor, we could separate PTCL-U into three molecular subgroups called U1, U2 and U3. The U1 gene expression signature included genes known to be associated with poor outcome in other tumors, such as CCND2. The U2 subgroup was associated with overexpression of genes involved in T-cell activation and apoptosis, including NFKB1 and BCL-2. The U3 subgroup was mainly defined by overexpression of genes involved in the IFN/JAK/STAT pathway. It comprised a majority of histiocyte-rich PTCL samples. Gene Ontology annotations revealed different functional pro. le for each subgroup. These results suggest the existence of distinct subtypes of PTCL-U with specific molecular profiles, and thus provide a basis to improve their classification and to develop new therapeutic targets.
引用
收藏
页码:1560 / 1570
页数:11
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