Crystal structure at 1.2 angstrom resolution and active site mapping of Escherichia coli peptidyl-tRNA hydrolase

被引:83
作者
Schmitt, E [1 ]
Mechulam, Y [1 ]
Fromant, M [1 ]
Plateau, P [1 ]
Blanquet, S [1 ]
机构
[1] ECOLE POLYTECH, CNRS, URA 1970, BIOCHIM LAB, F-91128 PALAISEAU, FRANCE
关键词
crystalline structure; esterase; peptidyl-tRNA; translation;
D O I
10.1093/emboj/16.15.4760
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Peptidyl-tRNA hydrolase activity from Escherichia coli ensures the recycling of peptidyl-tRNAs produced through abortion of translation, This activity, which is essential for cell viability, is carried out by a monomeric protein of 193 residues, The structure of crystalline peptidyl-tRNA hydrolase could be solved at 1.2 Angstrom resolution, It indicates a single alpha/beta globular domain built around a twisted mixed beta-sheet, similar to the central core of an aminopeptidase from Aeromonas proteolytica, This similarity allowed the characterization by site-directed mutagenesis of several residues of the active site of peptidyl-tRNA hydrolase, These residues, strictly conserved among the known peptidyl-tRNA hydrolase sequences, delineate a channel which, in the crystal, is occupied by the C-end of a neighbouring peptidyl-tRNA hydrolase molecule, Hence, several main chain atoms of three residues belonging to one peptidyl-tRNA hydrolase polypeptide establish contacts inside the active site of another peptidyl-tRNA hydrolase molecule, Such an interaction is assumed to represent the formation of a complex between the enzyme and one product of the catalysed reaction.
引用
收藏
页码:4760 / 4769
页数:10
相关论文
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