On the origin and evolution of new genes-a genomic and experimental perspective

被引:35
作者
Zhou, Qi [1 ]
Wang, Wen [1 ]
机构
[1] Chinese Acad Sci, Kunming Inst Zool, State Key Lab Genet Resources & Evolut, Max Planck Jr Res Grp, Kunming 650223, Peoples R China
基金
美国国家科学基金会;
关键词
origin of new genes; gene duplication; de novo origination; chimeric genes;
D O I
10.1016/S1673-8527(08)60085-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The inherent interest on the origin of genetic novelties can be traced back to Darwin. But it was not until recently that we were allowed to investigate the fundamental process of origin of new genes by the studies on newly evolved Young genes. Two indispensible steps are involved in this process: origin of new gene copies through various mutational mechanisms and evolution of novel functions, which further more leads to fixation of the new copies within populations. The theoretical framework for the former step formed in 1970s. Ohno proposed gene duplication as the most important mechanism producing new gene copies. He also believed that the most common fate for new gene copies is to become pseudogenes. This classical view was validated and was also challenged by the characterization of the first functional young gene jingwei in Drosophila. Recent genome-wide comparison on young genes of Drosophila has elucidated a comprehensive picture addressing remarkable roles of various mechanisms besides gene duplication during origin of new genes. Case surveys revealed it is not rare that new genes Would evolve novel structures and functions to contribute to the adaptive evolution of organisms. Here. we review recent advances in understanding how new genes originated and evolved on the basis of genome-wide results and experimental efforts on cases. We would finally discuss the future directions of this fast-growing research field in the Context of functional genomics era.
引用
收藏
页码:639 / 648
页数:10
相关论文
共 79 条
  • [1] Altschmied J, 2002, GENETICS, V161, P259
  • [2] Origination of an X-linked testes chimeric gene by illegitimate recombination in Drosophila
    Arguello, J. Roman
    Chen, Ying
    Yang, Shuang
    Wang, Wen
    Long, Manyuan
    [J]. PLOS GENETICS, 2006, 2 (05): : 745 - 754
  • [3] Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia
    Aury, Jean-Marc
    Jaillon, Olivier
    Duret, Laurent
    Noel, Benjamin
    Jubin, Claire
    Porcel, Betina M.
    Segurens, Beatrice
    Daubin, Vincent
    Anthouard, Veronique
    Aiach, Nathalie
    Arnaiz, Olivier
    Billaut, Alain
    Beisson, Janine
    Blanc, Isabelle
    Bouhouche, Khaled
    Camara, Francisco
    Duharcourt, Sandra
    Guigo, Roderic
    Gogendeau, Delphine
    Katinka, Michael
    Keller, Anne-Marie
    Kissmehl, Roland
    Klotz, Catherine
    Koll, France
    Le Mouel, Anne
    Lepere, Gersende
    Malinsky, Sophie
    Nowacki, Mariusz
    Nowak, Jacek K.
    Plattner, Helmut
    Poulain, Julie
    Ruiz, Francoise
    Serrano, Vincent
    Zagulski, Marek
    Dessen, Philippe
    Betermier, Mireille
    Weissenbach, Jean
    Scarpelli, Claude
    Schaechter, Vincent
    Sperling, Linda
    Meyer, Eric
    Cohen, Jean
    Wincker, Patrick
    [J]. NATURE, 2006, 444 (7116) : 171 - 178
  • [4] Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila
    Bai, Yongsheng
    Casola, Claudio
    Feschotte, Cedric
    Betran, Esther
    [J]. GENOME BIOLOGY, 2007, 8 (01)
  • [5] An Alu transposition model for the origin and expansion of human segmental duplications
    Bailey, JA
    Liu, G
    Eichler, EE
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2003, 73 (04) : 823 - 834
  • [6] Evidence for de novo evolution of testis-expressed genes in the Drosophila yakuba Drosophila erecta clade
    Begun, David J.
    Lindfors, Heather A.
    Kern, Andrew D.
    Jones, Corbin D.
    [J]. GENETICS, 2007, 176 (02) : 1131 - 1137
  • [7] Betrán E, 2003, GENETICS, V164, P977
  • [8] Homologous recombination as a mechanism for genome rearrangements: environmental and genetic effects
    Bishop, AJR
    Schiestl, RH
    [J]. HUMAN MOLECULAR GENETICS, 2000, 9 (16) : 2427 - 2434
  • [9] RETROPOSONS - SEEDS OF EVOLUTION
    BROSIUS, J
    [J]. SCIENCE, 1991, 251 (4995) : 753 - 753
  • [10] De novo origination of a new protein-coding gene in Saccharomyces cerevisiae
    Cai, Jing
    Zhao, Ruoping
    Jiang, Huifeng
    Wang, Wen
    [J]. GENETICS, 2008, 179 (01) : 487 - 496