On the origin and evolution of new genes-a genomic and experimental perspective

被引:34
作者
Zhou, Qi [1 ]
Wang, Wen [1 ]
机构
[1] Chinese Acad Sci, Kunming Inst Zool, State Key Lab Genet Resources & Evolut, Max Planck Jr Res Grp, Kunming 650223, Peoples R China
基金
美国国家科学基金会;
关键词
origin of new genes; gene duplication; de novo origination; chimeric genes;
D O I
10.1016/S1673-8527(08)60085-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The inherent interest on the origin of genetic novelties can be traced back to Darwin. But it was not until recently that we were allowed to investigate the fundamental process of origin of new genes by the studies on newly evolved Young genes. Two indispensible steps are involved in this process: origin of new gene copies through various mutational mechanisms and evolution of novel functions, which further more leads to fixation of the new copies within populations. The theoretical framework for the former step formed in 1970s. Ohno proposed gene duplication as the most important mechanism producing new gene copies. He also believed that the most common fate for new gene copies is to become pseudogenes. This classical view was validated and was also challenged by the characterization of the first functional young gene jingwei in Drosophila. Recent genome-wide comparison on young genes of Drosophila has elucidated a comprehensive picture addressing remarkable roles of various mechanisms besides gene duplication during origin of new genes. Case surveys revealed it is not rare that new genes Would evolve novel structures and functions to contribute to the adaptive evolution of organisms. Here. we review recent advances in understanding how new genes originated and evolved on the basis of genome-wide results and experimental efforts on cases. We would finally discuss the future directions of this fast-growing research field in the Context of functional genomics era.
引用
收藏
页码:639 / 648
页数:10
相关论文
共 79 条
  • [51] ANCIENT LINKAGE GROUPS AND FROZEN ACCIDENTS
    OHNO, S
    [J]. NATURE, 1973, 244 (5414) : 259 - 262
  • [52] Quantifying the major mechanisms of recent gene duplications in the human and mouse genomes: a novel strategy to estimate gene duplication rates
    Pan, Deng
    Zhang, Liqing
    [J]. GENOME BIOLOGY, 2007, 8 (08)
  • [53] Exon shuffling and other ways of module exchange
    Patthy, L
    [J]. MATRIX BIOLOGY, 1996, 15 (05) : 301 - 310
  • [54] Genome evolution and the evolution of exon-shuffling - a review
    Patthy, L
    [J]. GENE, 1999, 238 (01) : 103 - 114
  • [55] PATTHY L, 1996, MATRIX BIOL, V15, P311
  • [56] An RNA gene expressed during cortical development evolved rapidly in humans
    Pollard, Katherine S.
    Salama, Sofie R.
    Lambert, Nelle
    Lambot, Marie-Alexandra
    Coppens, Sandra
    Pedersen, Jakob S.
    Katzman, Sol
    King, Bryan
    Onodera, Courtney
    Siepel, Adam
    Kern, Andrew D.
    Dehay, Colette
    Igel, Haller
    Ares, Manuel, Jr.
    Vanderhaeghen, Pierre
    Haussler, David
    [J]. NATURE, 2006, 443 (7108) : 167 - 172
  • [57] Mitochondrial Targeting Adaptation of the Hominoid-Specific Glutamate Dehydrogenase Driven by Positive Darwinian Selection
    Rosso, Lia
    Marques, Ana C.
    Reichert, Andreas S.
    Kaessmann, Henrik
    [J]. PLOS GENETICS, 2008, 4 (08):
  • [58] Birth and rapid subcellular adaptation of a hominoid-specific CDC14 protein
    Rosso, Lia
    Marques, Ana Claudia
    Weier, Manuela
    Lambert, Nelle
    Lambot, Marie-Alexandra
    Vanderhaeghen, Pierre
    Kaessmann, Henrik
    [J]. PLOS BIOLOGY, 2008, 6 (06): : 1281 - 1291
  • [59] MECHANISMS OF NONHOMOLOGOUS RECOMBINATION IN MAMMALIAN-CELLS
    ROTH, DB
    PORTER, TN
    WILSON, JH
    [J]. MOLECULAR AND CELLULAR BIOLOGY, 1985, 5 (10) : 2599 - 2607
  • [60] ROTH DB, 1988, ILLEGITIMATE RECOMBI, P621