Detection of Vibrio cholerae and Vibrio vulnificus by duplex PCR specific to the groEL gene

被引:10
作者
Hossain, Muhammad Tofazzal [1 ]
Kim, Yu-Ri [1 ]
Kim, Eun-Young [1 ]
Lee, Jong-Min [1 ]
Kong, In-Soo [1 ]
机构
[1] Pukyong Natl Univ, Dept Biotechnol, Pusan 608737, South Korea
关键词
Duplex PCR; Flounder; groEL gene; Shellfish; V; cholerae; vulnificus; PARAHAEMOLYTICUS; SEQUENCE; ASSAY; IDENTIFICATION; STRAINS; SPP;
D O I
10.1007/s12562-012-0586-1
中图分类号
S9 [水产、渔业];
学科分类号
0908 ;
摘要
Vibrio cholerae and V. vulnificus are of major concern due to their effect on public health throughout the world. It is therefore imperative to identify a gene and method that are suitable for the accurate species-specific detection of these two species. A duplex polymerase chain reaction (PCR) assay was developed using two sets of primers targeting the groEL gene for the accurate simultaneous detection of V. cholerae and V. vulnificus. The nucleotide sequence of the groEL gene was compared with the sequences of other Vibrio and non-Vibrio species. The specificity of two primer sets for duplex PCR was checked using 24 Vibrio and 8 non-Vibrio species. The primer sets were found to be specific for these two species and could detect both of the target bacterial species without any ambiguity, even when comparing closely related species. For both species, the detection limit was 100 pg of purified genomic DNA. The duplex PCR showed high specificity and sensitivity for each species and was sufficient for the detection of V. cholerae and V. vulnificus from artificially infected shellfish tissue, flounder, and even inoculated seawater. This method is simple and cost-effective, and can be utilized for the simultaneous detection of both species, thus representing an effective tool for both epidemiologist and ecologist.
引用
收藏
页码:335 / 340
页数:6
相关论文
共 24 条
[1]  
Ausubel F., 1998, CURRENT PROTOCOLS MO
[2]   Microarray analysis of microbial virulence factors [J].
Chizhikov, V ;
Rasooly, A ;
Chumakov, K ;
Levy, DD .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2001, 67 (07) :3258-3263
[3]   Analysis of clinical and environmental strains of nontoxigenic Vibrio cholerae for susceptibility to CTXΦ:: Molecular basis for origination of new strains with epidemic potential [J].
Faruque, SM ;
Asadulghani ;
Saha, MN ;
Alim, ARMA ;
Albert, MJ ;
Islam, KMN ;
Mekalanos, JJ .
INFECTION AND IMMUNITY, 1998, 66 (12) :5819-5825
[4]   Multiplex PCR assays for simultaneous detection and characterization of Vibrio vulnificus strains [J].
Han, F. ;
Ge, B. .
LETTERS IN APPLIED MICROBIOLOGY, 2010, 51 (02) :234-240
[5]   Application of groEL gene for the species-specific detection of Vibrio parahaemolyticus by PCR [J].
Hossain, M. T. ;
Kim, E. -Y. ;
Kim, Y. -R. ;
Kim, D. -G. ;
Kong, I. -S. .
LETTERS IN APPLIED MICROBIOLOGY, 2012, 54 (01) :67-72
[6]   Dynamics and predictive modelling of Vibrio spp. in the Neuse river estuary, north carolina, USA [J].
Hsieh, Jennifer L. ;
Fries, J. Stephen ;
Noble, Rachel T. .
ENVIRONMENTAL MICROBIOLOGY, 2008, 10 (01) :57-64
[7]  
Hu YS, 2010, AFR J MICROBIOL RES, V4, P1733
[8]   Multiplex PCR assay for identification of three major pathogenic Vibrio spp., Vibrio cholerae, Vibrio parahaemolyticus, and Vibrio vulnificus [J].
Izumiya, Hidemasa ;
Matsumoto, Kazutoshi ;
Yahiro, Shunsuke ;
Lee, Jiyoung ;
Morita, Masatomo ;
Yamamoto, Shouji ;
Arakawa, Eiji ;
Ohnishi, Makoto .
MOLECULAR AND CELLULAR PROBES, 2011, 25 (04) :174-176
[9]   Multiplex polymerase chain reaction-based assay for the specific detection of toxin-producing Vibrio cholerae in fish and fishery products [J].
Jeyasekaran, Geevaretnam ;
Raj, Kannan Thirumalai ;
Shakila, Robinson Jeya ;
Thangarani, Albin Jemila ;
Sukumar, Durairaj .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2011, 90 (03) :1111-1118
[10]   Vibrio vulnificus: Disease and Pathogenesis [J].
Jones, Melissa K. ;
Oliver, James D. .
INFECTION AND IMMUNITY, 2009, 77 (05) :1723-1733