Phylogeny and evolutionary genetics of porcine parvovirus in wild boars

被引:51
作者
Cadar, Daniel [1 ]
Dan, Adam [2 ]
Tombacz, Kata [3 ]
Lorincz, Marta [3 ]
Kiss, Timea [1 ]
Becskei, Zsolt [4 ]
Spinu, Marina [1 ]
Tuboly, Tamas [3 ]
Csagola, Attila [3 ]
机构
[1] Univ Agr Sci & Vet Med, Dept Infect Dis, Fac Vet Med, Cluj Napoca, Romania
[2] Cent Agr Off, Mol Biol Lab, Budapest, Hungary
[3] Szent Istvan Univ, Fac Vet Sci, Dept Microbiol & Infect Dis, Budapest, Hungary
[4] Univ Belgrade, Fac Vet Med, Dept Anim Breeding & Genet, Belgrade, Serbia
关键词
Phylogeny; PPV; Genetic diversity; Evolution; Wild boar; SUS-SCROFA; EXPERIMENTAL REPRODUCTION; EXPERIMENTAL-INFECTION; BACTERIAL PATHOGENS; VIRAL EVOLUTION; VIRULENT-STRAIN; CIRCOVIRUS; VIRUS; PIGS; PREVALENCE;
D O I
10.1016/j.meegid.2012.04.020
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Porcine parvovirus (PPV) is widespread among swine and is responsible for reproductive failure of susceptible sows, characterized by embryonic and fetal death. Studies showed that PPV in domestic pig is genetically diverse and some strains differ from the ones used for vaccination. Organ samples from wild boars and domestic pigs were collected in Transylvania (Romania) and tested for the presence of PPV by polymerase chain reaction. Positive samples were grouped and 14 from the wild boar and 1 from the domestic pig PPVs were selected for VP1/VP2 sequence analysis and comparison with available GenBank data. The molecular clock analysis revealed that PPV has a relatively recent evolutionary history, originated approximately 120 years ago and the main divergence occurred in the last 20-60 years. Phylogenetic and residue substitution analysis showed that the viruses could be divided into 6 distinct clusters and that wild boar PPVs were partially different and independent from domestic pig PPVs. PPVs of wild boars proved to be more diverse than viruses of domestic pigs. The presence of the highly virulent 27a-like PPV strains in wild boars was also detected. (C) 2012 Elsevier B.V. All rights reserved.
引用
收藏
页码:1163 / 1171
页数:9
相关论文
共 65 条
[11]   PATHOGENICITY OF A SKIN ISOLATE OF PORCINE PARVOVIRUS IN SWINE FETUSES [J].
CHOI, CS ;
MOLITOR, TW ;
JOO, HS ;
GUNTHER, R .
VETERINARY MICROBIOLOGY, 1987, 15 (1-2) :19-29
[12]   Genetic analysis of feline panleukopenia viruses from cats with gastroenteritis [J].
Decaro, N. ;
Desario, C. ;
Miccolupo, A. ;
Campolo, M. ;
Parisi, A. ;
Martella, V. ;
Amorisco, F. ;
Lucente, M. S. ;
Lavazza, A. ;
Buonavoglia, C. .
JOURNAL OF GENERAL VIROLOGY, 2008, 89 :2290-2298
[13]   Infectious agents identified in pigs with multifocal interstitial nephritis at slaughter [J].
Drolet, R ;
D'Allaire, S ;
Larochelle, R ;
Magar, R ;
Ribotta, M ;
Higgins, R .
VETERINARY RECORD, 2002, 150 (05) :139-143
[14]  
Drummond AJ, 2005, MOL BIOL EVOL, V22, P1185, DOI [10.1093/molbev/msi103, 10.1093/molbev/mss075]
[15]   BEAST: Bayesian evolutionary analysis by sampling trees [J].
Drummond, Alexei J. ;
Rambaut, Andrew .
BMC EVOLUTIONARY BIOLOGY, 2007, 7 (1)
[16]   Relaxed phylogenetics and dating with confidence [J].
Drummond, Alexei J. ;
Ho, Simon Y. W. ;
Phillips, Matthew J. ;
Rambaut, Andrew .
PLOS BIOLOGY, 2006, 4 (05) :699-710
[17]   Insights into the Evolutionary History of an Emerging Livestock Pathogen: Porcine Circovirus 2 [J].
Firth, Cadhla ;
Charleston, Michael A. ;
Duffy, Siobain ;
Shapiro, Beth ;
Holmes, Edward C. .
JOURNAL OF VIROLOGY, 2009, 83 (24) :12813-12821
[18]   A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood [J].
Guindon, S ;
Gascuel, O .
SYSTEMATIC BIOLOGY, 2003, 52 (05) :696-704
[19]  
Hall TA., 1999, NUCL ACIDS S SERIES, V41, P95, DOI DOI 10.14344/IOC.ML.11.1
[20]   Phylogenetic analysis of porcine parvoviruses from swine samples in China [J].
Hao, Xiaofang ;
Lu, Zengjun ;
Sun, Pu ;
Fu, Yuanfang ;
Cao, Yimei ;
Li, Pinghua ;
Bai, Xingwen ;
Bao, Huifang ;
Xie, Baoxia ;
Chen, Yingli ;
Li, Dong ;
Liu, Zaixin .
VIROLOGY JOURNAL, 2011, 8