Rapid and accurate calculation of small-angle scattering profiles using the golden ratio

被引:35
作者
Watson, Max C. [1 ]
Curtis, Joseph E. [1 ]
机构
[1] NIST, Ctr Neutron Res, Gaithersburg, MD 20899 USA
基金
美国国家科学基金会; 英国工程与自然科学研究理事会;
关键词
X-RAY-SCATTERING; DIRECT SHAPE DETERMINATION; MONTE-CARLO SIMULATIONS; NEUTRON-SCATTERING; BIOLOGICAL MACROMOLECULES; POWDER DIFFRACTION; PROTEIN SOLUTIONS; WEB SERVER; SIZE; COMPUTATION;
D O I
10.1107/S002188981301666X
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Calculating the scattering intensity of an N-atom system is a numerically exhausting O(N-2) task. A simple approximation technique that scales linearly with the number of atoms is presented. Using an exact expression for the scattering intensity I(q) at a given wavevector q, the rotationally averaged intensity I(q) is computed by evaluating I(q) in several scattering directions. The orientations of the q vectors are taken from a quasi-uniform spherical grid generated by the golden ratio. Using various biomolecules as examples, this technique is compared with an established multipole expansion method. For a given level of speed, the technique is more accurate than the multipole expansion for anisotropically shaped molecules, while comparable in accuracy for globular shapes. The processing time scales sub-linearly in N when the atoms are identical and lie on a lattice. The procedure is easily implemented and should accelerate the analysis of small-angle scattering data.
引用
收藏
页码:1171 / 1177
页数:7
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