The barbamide biosynthetic gene cluster: a novel marine cyanobacterial system of mixed polyketide synthase (PKS)-non-ribosomal peptide synthetase (NRPS) origin involving an unusual trichloroleucyl starter unit

被引:184
作者
Chang, ZX
Flatt, P
Gerwick, WH
Nguyen, VA
Willis, CL
Sherman, DH
机构
[1] Univ Minnesota, Dept Microbiol, Minneapolis, MN 55455 USA
[2] Oregon State Univ, Coll Pharm, Corvallis, OR 97331 USA
[3] Univ Bristol, Sch Chem, Bristol BS8 1TS, Avon, England
关键词
Lyngbya majuscula; natural product biosynthesis; modular polyketide synthase; non-ribosomal peptide synthetase; halogenase;
D O I
10.1016/S0378-1119(02)00860-0
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Barbamide was extracted from the marine cyanobacterium Lyngbya majuscula strain 19L as a chlorinated lipopeptide for its potent molluscicidal activity. Precursor incorporation studies indicated that it is derived from acetate, L-phenylalanine, L-leucine and L-cysteine. The gene cluster responsible for biosynthesis of barbamide (bar) was cloned and characterized in this study. DNA sequence analysis of cosmid pLM49 revealed a cluster of 12 open reading frames (barA-barK) extending 26 kb including the expected polyketide synthase and non-ribosomal peptide synthetase modules and tailoring genes. The genetic architecture and domain organization of the bar cluster supports the assignment based on the apparent co-linearity of the systems. The activity assay of adenylation domains of barD (A(D)), barE (A(E)) and barG (A(G2) for module 2) in an amino acid-dependent ATP-pyrophosphate exchange experiment supports the conclusion that barbamide is synthesized from acetate, L-phenylalanine, L-cysteine and L-leucine with trichloroleucine as a direct precursor by a mixed polyketide synthase/non-ribosomal polypeptide synthetase. Assembly of barbamide includes unique biochemical mechanisms for chlorination, one-carbon truncation during chain elongation, E-double bond formation and thiazole ring formation. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:235 / 247
页数:13
相关论文
共 30 条
  • [1] Metabolic diversity in myxobacteria:: identification of the myxalamid and the stigmatellin biosynthetic gene cluster of Stigmatella aurantiaca Sg a15 and a combined polyketide-(poly)peptide gene cluster from the epothilone producing strain Sorangium cellulosum So ce90
    Beyer, S
    Kunze, B
    Silakowski, B
    Müller, R
    [J]. BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION, 1999, 1445 (02): : 185 - 195
  • [2] PLASMID CLONING VECTORS FOR THE CONJUGAL TRANSFER OF DNA FROM ESCHERICHIA-COLI TO STREPTOMYCES SPP
    BIERMAN, M
    LOGAN, R
    OBRIEN, K
    SENO, ET
    RAO, RN
    SCHONER, BE
    [J]. GENE, 1992, 116 (01) : 43 - 49
  • [3] Marine cyanobacteria - a prolific source of natural products
    Burja, AM
    Banaigs, B
    Abou-Mansour, E
    Burgess, JG
    Wright, PC
    [J]. TETRAHEDRON, 2001, 57 (46) : 9347 - 9377
  • [4] Vanadium haloperoxidases
    Butler, A
    [J]. CURRENT OPINION IN CHEMICAL BIOLOGY, 1998, 2 (02) : 279 - 285
  • [5] Predictive, structure-based model of amino acid recognition by nonribosomal peptide synthetase adenylation domains
    Challis, GL
    Ravel, J
    Townsend, CA
    [J]. CHEMISTRY & BIOLOGY, 2000, 7 (03): : 211 - 224
  • [6] A 2ND BRANCHED-CHAIN ALPHA-KETO ACID DEHYDROGENASE GENE-CLUSTER (BKDFGH) FROM STREPTOMYCES-AVERMITILIS - ITS RELATIONSHIP TO AVERMECTIN BIOSYNTHESIS AND THE CONSTRUCTION OF A BKDF MUTANT SUITABLE FOR THE PRODUCTION OF NOVEL ANTIPARASITIC AVERMECTINS
    DENOYA, CD
    FEDECHKO, RW
    HAFNER, EW
    MCARTHUR, HAI
    MORGENSTERN, MR
    SKINNER, DD
    STUTZMANENGWALL, K
    WAX, RG
    WERNAU, WC
    [J]. JOURNAL OF BACTERIOLOGY, 1995, 177 (12) : 3504 - 3511
  • [7] Dittmann E, 2001, APPL MICROBIOL BIOT, V57, P467
  • [8] Dipeptide formation on engineered hybrid peptide synthetases
    Doekel, S
    Marahiel, MA
    [J]. CHEMISTRY & BIOLOGY, 2000, 7 (06): : 373 - 384
  • [9] Hybrid peptide-polyketide natural products:: Biosynthesis and prospects toward engineering novel molecules
    Du, LH
    Sánchez, C
    Shen, B
    [J]. METABOLIC ENGINEERING, 2001, 3 (01) : 78 - 95
  • [10] Marine natural products
    Faulkner, DJ
    [J]. NATURAL PRODUCT REPORTS, 2000, 17 (01) : 7 - 55