At-TAX:: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana

被引：75

作者：

Laubinger, Sascha ^{[1
]}

Zeller, Georg ^{[1
,2
]}

Henz, Stefan R. ^{[1
]}

Sachsenberg, Timo ^{[1
]}

Widmer, Christian K. ^{[2
]}

Naouar, Naira ^{[3
,4
]}

Vuylsteke, Marnik ^{[3
,4
]}

Schoelkopf, Bernhard ^{[5
]}

Raetsch, Gunnar ^{[2
]}

Weigel, Detlef ^{[1
]}

机构：

[1] Max Planck Inst Dev Biol, Dept Mol Biol, D-72076 Tubingen, Germany

[2] Max Planck Gesell, Friedrich Miescher Lab, D-72076 Tubingen, Germany

[3] Univ Ghent VIB, Dept Plant Syst Biol, B-9052 Ghent, Belgium

[4] Univ Ghent, Dept Mol Genet, B-9052 Ghent, Belgium

[5] Max Planck Inst Biol Cybernet, Dept Empir Inference, D-72076 Tubingen, Germany

来源：

GENOME BIOLOGY | 2008年 / 9卷 / 07期

关键词：

D O I：

10.1186/gb-2008-9-7-r112

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

Gene expression maps for model organisms, including Arabidopsis thaliana, have typically been created using gene-centric expression arrays. Here, we describe a comprehensive expression atlas, Arabidopsis thaliana Tiling Array Express (At-TAX), which is based on whole-genome tiling arrays. We demonstrate that tiling arrays are accurate tools for gene expression analysis and identified more than 1,000 unannotated transcribed regions. Visualizations of gene expression estimates, transcribed regions, and tiling probe measurements are accessible online at the At-TAX homepage.

引用

页数：16

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