Identification of Dynamically Regulated MicroRNA and mRNA Networks in Developing Oligodendrocytes

被引:205
作者
Lau, Pierre [1 ]
Verrier, Jonathan D. [3 ]
Nielsen, Joseph A. [1 ]
Johnson, Kory R. [2 ]
Notterpek, Lucia [3 ]
Hudson, Lynn D. [1 ]
机构
[1] NINDS, Sect Dev Genet, Natl Inst Hlth, Bethesda, MD 20892 USA
[2] NINDS, Bioinformat Neurosci Grp, Informat Technol Program, Div Intramural Res,NIH, Bethesda, MD 20892 USA
[3] Univ Florida, McKnight Brain Inst, Dept Neurosci, Gainesville, FL 32610 USA
关键词
microRNA; posttranscriptional regulation; oligodendrocyte; PMP22; myelin; glia;
D O I
10.1523/JNEUROSCI.1932-08.2008
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
MicroRNAs (miRNAs) play important roles in modulating gene expression at the posttranscriptional level. In postnatal oligodendrocyte lineage cells, the miRNA expression profile (" microRNAome") contains 43 miRNAs whose expression dynamically changes during the transition from A2B5(+) oligodendrocyte progenitor cells to premyelinating GalC(+) cells. The combination of microRNAome profiling with analyses of the oligodendrocyte transcriptome reveals a target bias for a class of miRNAs which includes miR-9. We show that miR-9 is downregulated during oligodendrocyte differentiation. In addition, miR-9 expression level inversely correlates with the expression of its predicted targets, among which is the peripheral myelin protein PMP22. We found that PMP22 mRNA but not protein is detectable in oligodendrocytes, whereas Schwann cells producing PMP22 protein lack miR-9. We demonstrate that miR-9 interacts with the 3' untranslated region of PMP22 and downregulates its expression. Our results support models in which miRNAs can act as guardians of the transcriptome.
引用
收藏
页码:11720 / 11730
页数:11
相关论文
共 44 条
[1]   The functions of animal microRNAs [J].
Ambros, V .
NATURE, 2004, 431 (7006) :350-355
[2]   Peripheral myelin protein 22 is in complex with α6β4 integrin, and its absence alters the Schwann cell basal lamina [J].
Amici, SA ;
Dunn, WA ;
Murphy, AJ ;
Adams, NC ;
Gale, NW ;
Valenzuela, DM ;
Yancopoulos, GD ;
Notterpek, L .
JOURNAL OF NEUROSCIENCE, 2006, 26 (04) :1179-1189
[3]   MicroRNA-21 is an antiapoptotic factor in human glioblastoma cells [J].
Chan, JA ;
Krichevsky, AM ;
Kosik, KS .
CANCER RESEARCH, 2005, 65 (14) :6029-6033
[4]   DNA DELETION ASSOCIATED WITH HEREDITARY NEUROPATHY WITH LIABILITY TO PRESSURE PALSIES [J].
CHANCE, PF ;
ALDERSON, MK ;
LEPPIG, KA ;
LENSCH, MW ;
MATSUNAMI, N ;
SMITH, B ;
SWANSON, PD ;
ODELBERG, SJ ;
DISTECHE, CM ;
BIRD, TD .
CELL, 1993, 72 (01) :143-151
[5]   Isolation and culture of rat and mouse oligodendrocyte precursor cells [J].
Chen, Ying ;
Balasubramaniyan, Veerakumar ;
Peng, Jie ;
Hurlock, Edward C. ;
Tallquist, Michelle ;
Li, Jianrong ;
Lu, Q. Richard .
NATURE PROTOCOLS, 2007, 2 (05) :1044-1051
[6]   A role for semaphorins and neuropilins in oligodendrocyte guidance [J].
Cohen, RI ;
Rottkamp, DM ;
Maric, D ;
Barker, JL ;
Hudson, LD .
JOURNAL OF NEUROCHEMISTRY, 2003, 85 (05) :1262-1278
[7]   Functional genomic analysis of oligodendrocyte differentiation [J].
Dugas, Jason C. ;
Tai, Yu Chuan ;
Speed, Terence P. ;
Ngai, John ;
Barres, Ben A. .
JOURNAL OF NEUROSCIENCE, 2006, 26 (43) :10967-10983
[8]   The widespread impact of mammalian microRNAs on mRNA repression and evolution [J].
Farh, KKH ;
Grimson, A ;
Jan, C ;
Lewis, BP ;
Johnston, WK ;
Lim, LP ;
Burge, CB ;
Bartel, DP .
SCIENCE, 2005, 310 (5755) :1817-1821
[9]   MicroRNA targeting specificity in mammals: Determinants beyond seed pairing [J].
Grimson, Andrew ;
Farh, Kyle Kai-How ;
Johnston, Wendy K. ;
Garrett-Engele, Philip ;
Lim, Lee P. ;
Bartel, David P. .
MOLECULAR CELL, 2007, 27 (01) :91-105
[10]   Canalization of development by microRNAs [J].
Hornstein, Eran ;
Shomron, Noam .
NATURE GENETICS, 2006, 38 (Suppl 6) :S20-S24