The European database on small subunit ribosomal RNA

被引：203

作者：

Wuyts, J

Van de Peer, Y

Winkelmans, T

De Wachter, R

机构：

[1] Univ Instelling Antwerp, Dept Biochem, B-2610 Antwerp, Belgium

[2] State Univ Ghent VIB, Dept Plantengenet, B-9000 Ghent, Belgium

来源：

NUCLEIC ACIDS RESEARCH | 2002年 / 30卷 / 01期

关键词：

D O I：

10.1093/nar/30.1.183

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The European database on SSU rRNA can be consulted via the World WideWeb at http://rrna.uia.ac.be/ssu/ and compiles all complete or nearly complete small subunit ribosomal RNA sequences. Sequences are provided in aligned format. The alignment takes into account the secondary structure information derived by comparative sequence analysis of thousands of sequences. Additional information such as literature references, taxonomy, secondary structure models and nucleotide variability maps, is also available.

引用

页码：183 / 185

页数：3

共 12 条

[1] GENE ORGANIZATION AND PRIMARY STRUCTURE OF A RIBOSOMAL-RNA OPERON FROM ESCHERICHIA-COLI
BROSIUS, J
DULL, TJ
SLEETER, DD
NOLLER, HF
[J]. JOURNAL OF MOLECULAR BIOLOGY, 1981, 148 (02) : 107 - 127
[2] DERIJK P, 1993, COMPUT APPL BIOSCI, V9, P735
[3] COLLECTION OF SMALL-SUBUNIT (16S-LIKE AND 16S-LIKE) RIBOSOMAL-RNA STRUCTURES
GUTELL, RR
[J]. NUCLEIC ACIDS RESEARCH, 1993, 21 (13) : 3051 - 3054
[4] COMPILATION OF SMALL RIBOSOMAL-SUBUNIT RNA STRUCTURES
NEEFS, JM
VANDEPEER, Y
DERIJK, P
CHAPELLE, S
DEWACHTER, R
[J]. NUCLEIC ACIDS RESEARCH, 1993, 21 (13) : 3025 - 3049
[5] RAES J, 1999, EMBNET NEWS, V6
[6] The EMBL Nucleotide Sequence Database
Stoesser, G
Baker, W
van den Broek, A
Camon, E
Garcia-Pastor, M
Kanz, C
Kulikova, T
Leinonen, R
Lin, Q
Lombard, V
Lopez, R
Redaschi, N
Stoehr, P
Tuli, MA
Tzouvara, K
Vaughan, R
[J]. NUCLEIC ACIDS RESEARCH, 2002, 30 (01) : 21 - 26
[7] The EMBL nucleotide sequence database
Stoesser, G
Baker, W
van den Broek, A
Camon, E
Garcia-Pastor, M
Kanz, C
Kulikova, T
Lombard, V
Lopez, R
Parkinson, H
Redaschi, N
Sterk, P
Stoehr, P
Tuli, MA
[J]. NUCLEIC ACIDS RESEARCH, 2001, 29 (01) : 17 - 21
[8] The European Small Subunit Ribosomal RNA database
Van de Peer, Y
De Rijk, P
Wuyts, J
Winkelmans, T
De Wachter, R
[J]. NUCLEIC ACIDS RESEARCH, 2000, 28 (01) : 175 - 176
[9] The evolution of stramenopiles and alveolates as derived by ''substitution rate calibration'' of small ribosomal subunit RNA
VandePeer, Y
VanderAuwera, G
DeWachter, R
[J]. JOURNAL OF MOLECULAR EVOLUTION, 1996, 42 (02) : 201 - 210
[10] VANDEPEER Y, 1994, COMPUT APPL BIOSCI, V10, P569

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