The European Small Subunit Ribosomal RNA database

被引:199
作者
Van de Peer, Y [1 ]
De Rijk, P [1 ]
Wuyts, J [1 ]
Winkelmans, T [1 ]
De Wachter, R [1 ]
机构
[1] Univ Instelling Antwerp, Dept Biochem, B-2610 Antwerp, Belgium
关键词
D O I
10.1093/nar/28.1.175
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The European database of the Small Subunit (SSU) Ribosomal RNA is a curated database that strives to collect all- information about the primary and secondary structure of completely or nearly-completely sequenced rRNAs, Furthermore, the database complies additional information such as literature references and taxonomic status of the organism the sequence was derived from. The database can be consulted via the WWW at URL http://rrna.uia.ac.be/ssu/. Through the WWW, sequences can be easily selected either one by one, by taxonomic group, or by a combination of both, and can be retrieved in different sequence and alignment formats.
引用
收藏
页码:175 / 176
页数:2
相关论文
共 12 条
  • [1] The EMBL Nucleotide Sequence Database
    Baker, W
    van den Broek, A
    Camon, E
    Hingamp, P
    Sterk, P
    Stoesser, G
    Tuli, MA
    [J]. NUCLEIC ACIDS RESEARCH, 2000, 28 (01) : 19 - 23
  • [2] GenBank
    Benson, DA
    Boguski, MS
    Lipman, DJ
    Ostell, J
    Ouellette, BFF
    Rapp, BA
    Wheeler, DL
    [J]. NUCLEIC ACIDS RESEARCH, 1999, 27 (01) : 12 - 17
  • [3] GenBank
    Benson, DA
    Karsch-Mizrachi, I
    Lipman, DJ
    Ostell, J
    Rapp, BA
    Wheeler, DL
    [J]. NUCLEIC ACIDS RESEARCH, 2000, 28 (01) : 15 - 18
  • [4] TEMPO, MODE, THE PROGENOTE, AND THE UNIVERSAL ROOT
    DOOLITTLE, WF
    BROWN, JR
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (15) : 6721 - 6728
  • [5] COLLECTION OF SMALL-SUBUNIT (16S- AND 16S-LIKE) RIBOSOMAL-RNA STRUCTURES - 1994
    GUTELL, RR
    [J]. NUCLEIC ACIDS RESEARCH, 1994, 22 (17) : 3502 - 3507
  • [6] NOLLER HF, 1990, RIBOSOME, P73
  • [7] RIBOSOMAL-RNA - A KEY TO PHYLOGENY
    OLSEN, GJ
    WOESE, CR
    [J]. FASEB JOURNAL, 1993, 7 (01) : 113 - 123
  • [8] The EMBL Nucleotide Sequence Database
    Stoesser, G
    Tuli, MA
    Lopez, R
    Sterk, P
    [J]. NUCLEIC ACIDS RESEARCH, 1999, 27 (01) : 18 - 24
  • [9] MUTATION AT POSITION 791 IN ESCHERICHIA-COLI 16S RIBOSOMAL-RNA AFFECTS PROCESSES INVOLVED IN THE INITIATION OF PROTEIN-SYNTHESIS
    TAPPRICH, WE
    GOSS, DJ
    DAHLBERG, AE
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (13) : 4927 - 4931
  • [10] Database on the structure of small subunit ribosomal RNA
    Van de Peer, Y
    Robbrecht, E
    de Hoog, S
    Caers, A
    De Rijk, P
    De Wachter, R
    [J]. NUCLEIC ACIDS RESEARCH, 1999, 27 (01) : 179 - 183