Specific force field parameters determination for the hybrid ab initio QM/MM LSCF method

被引:108
作者
Ferré, N [1 ]
Assfeld, X [1 ]
Rivail, JL [1 ]
机构
[1] Univ Nancy 1, UMR CNRS 7565, Equipe Chim & Biochim Theor, F-54506 Vandoeuvre Les Nancy, France
关键词
QM/MM method; strictly localized bond orbitals; hybrid force field; macromolecular system; biomolecule; DFT; ab initio; post-Hartree-Fock;
D O I
10.1002/jcc.10058
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The pure quantum mechanics method, called Local Self-Consistent Field (LSCF), that allows to optimize a wave function within the constraint that some predefined spinorbitals are kept frozen, is discussed. These spinorbitals can be of any shape, and their occupation numbers can be 0 or 1. Any post-Hartree-Fock method, based on the restricted or unrestricted Hartree-Fock Slater determinant, and Kohn-Sham-based DFT method are available. The LSCF method is easily applied to hybrid quantum mechanics/molecular mechanics (QM/MM) procedure where the quantum and the classical parts are covalently bonded. The complete methodology of our hybrid QM/MM scheme is detailed for studies of macromolecular systems. Not only the energy but also the gradients are derived; thus, the full geometry optimization of the whole system is feasible. We show that only specific force field parameters are needed for a correct description of the molecule, they are given for some general chemical bonds. A careful analysis of the errors induced by the use of molecular mechanics in hybrid computation show that a general procedure can be derived to obtain accurate results at low computation effort. The methodology is applied to the structure determination of the crambin protein and to Menshutkin reactions between primary amines and chloromethane. (C) 2002 Wiley Periodicals, Inc.
引用
收藏
页码:610 / 624
页数:15
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