COMPONENTS OF UNCERTAINTY IN SPECIES DISTRIBUTION ANALYSIS: A CASE STUDY OF THE GREAT GREY SHRIKE

被引:178
作者
Dormann, Carsten F. [1 ]
Purschke, Oliver [1 ,2 ]
Marquez, Jaime R. Garcia [1 ,3 ]
Lautenbach, Sven [1 ]
Schroeder, Boris [4 ]
机构
[1] UFZ Helmholtz Ctr Environm Res, Dept Computat Landscape Ecol, D-04318 Leipzig, Germany
[2] Lund Univ, Dept Phys Geog & Ecosyst Anal, GeoBiosphere Sci Ctr, S-22362 Lund, Sweden
[3] Univ Bonn, Nees Inst Plant Biodivers, D-53115 Bonn, Germany
[4] Univ Potsdam, Inst Geoecol, D-14476 Potsdam, Germany
关键词
artificial neural network; best subset regression; climate change; collinearity; data uncertainty; Generalized Additive Models; GAM; Generalized Linear Models; GLM; prediction; Saxony; Germany; sequential regression; species distribution model; stepwise model selection;
D O I
10.1890/07-1772.1
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Sophisticated statistical analyses are common in ecological research, particularly in species distribution modeling. The effects of sometimes arbitrary decisions during the modeling procedure on the final outcome are difficult to assess, and to date are largely unexplored. We conducted an analysis quantifying the contribution of uncertainty in each step during the model-building sequence to variation in model validity and climate change projection uncertainty. Our study system was the distribution of the Great Grey Shrike in the German federal state of Saxony. For each of four steps (data quality, collinearity method, model type, and variable selection), we ran three different options in a factorial experiment, leading to 81 different model approaches. Each was subjected to a fivefold cross-validation, measuring area under curve (AUC) to assess model quality. Next, we used three climate change scenarios times three precipitation realizations to project future distributions from each model, yielding 729 projections. Again, we analyzed which step introduced most variability (the four model-building steps plus the two scenario steps) into predicted species prevalences by the year 2050. Predicted prevalences ranged from a factor of 0.2 to a factor of 10 of present prevalence, with the majority of predictions between 1.1 and 4.2 (inter-quartile range). We found that model type and data quality dominated this analysis. In particular, artificial neural networks yielded low cross-validation robustness and gave very conservative climate change predictions. Generalized linear and additive models were very similar in quality and predictions, and superior to neural networks. Variations in scenarios and realizations had very little effect, due to the small spatial extent of the study region and its relatively small range of climatic conditions. We conclude that, for climate projections, model type and data quality were the most influential factors. Since comparison of model types has received good coverage in the ecological literature, effects of data quality should now come under more scrutiny.
引用
收藏
页码:3371 / 3386
页数:16
相关论文
共 87 条
[11]   Equifinality, data assimilation, and uncertainty estimation in mechanistic modelling of complex environmental systems using the GLUE methodology [J].
Beven, K ;
Freer, J .
JOURNAL OF HYDROLOGY, 2001, 249 (1-4) :11-29
[12]   Spatial sensitivity of species habitat patterns to scenarios of land use change (Switzerland) [J].
Bolliger, Janine ;
Kienast, Felix ;
Soliva, Reto ;
Rutherford, Gillian .
LANDSCAPE ECOLOGY, 2007, 22 (05) :773-789
[13]  
BOOTH GD, 1994, USDA FOR SERV INT R, P1
[14]   Presence-absence versus presence-only modelling methods for predicting bird habitat suitability [J].
Brotons, L ;
Thuiller, W ;
Araújo, MB ;
Hirzel, AH .
ECOGRAPHY, 2004, 27 (04) :437-448
[15]   Updating bird species distribution at large spatial scales: applications of habitat modelling to data from long-term monitoring programs [J].
Brotons, Lluis ;
Herrando, Sergi ;
Pla, Magda .
DIVERSITY AND DISTRIBUTIONS, 2007, 13 (03) :276-288
[16]  
Burnham K. P., 2002, A practical informationtheoretic approach, DOI [DOI 10.1007/B97636, 10.1007/b97636]
[17]   MODEL UNCERTAINTY, DATA MINING AND STATISTICAL-INFERENCE [J].
CHATFIELD, C .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES A-STATISTICS IN SOCIETY, 1995, 158 :419-466
[18]   HIERARCHICAL PARTITIONING [J].
CHEVAN, A ;
SUTHERLAND, M .
AMERICAN STATISTICIAN, 1991, 45 (02) :90-96
[19]   Soil nutritional factors improve models of plant species distribution:: an illustration with Acer campestre (L.) in France [J].
Coudun, Christophe ;
Gegout, Jean-Claude ;
Piedallu, Christian ;
Rameau, Jean-Claude .
JOURNAL OF BIOGEOGRAPHY, 2006, 33 (10) :1750-1763
[20]   Sensitivity and uncertainty analysis in spatial modelling based on GIS [J].
Crosetto, M ;
Tarantola, S ;
Saltelli, A .
AGRICULTURE ECOSYSTEMS & ENVIRONMENT, 2000, 81 (01) :71-79