A Novel Human Polycomb Binding Site Acts As a Functional Polycomb Response Element in Drosophila

被引:23
作者
Cuddapah, Suresh [1 ]
Roh, Tae-Young [2 ]
Cui, Kairong [2 ]
Jose, Cynthia C. [1 ]
Fuller, Margaret T. [4 ]
Zhao, Keji [2 ]
Chen, Xin [3 ]
机构
[1] NYU, Dept Environm Med, Sch Med, New York, NY 10016 USA
[2] NHLBI, Lab Mol Immunol, NIH, Bethesda, MD 20892 USA
[3] Johns Hopkins Univ, Dept Biol, Baltimore, MD 21218 USA
[4] Stanford Univ, Dept Dev Biol & Genet, Sch Med, Stanford, CA 94305 USA
来源
PLOS ONE | 2012年 / 7卷 / 05期
基金
美国国家卫生研究院;
关键词
HISTONE METHYLTRANSFERASE ACTIVITY; GROUP PROTEINS; DEVELOPMENTAL REGULATORS; SILENCING MECHANISMS; CHROMATIN DOMAINS; CELLULAR MEMORY; TARGET GENES; DNA-BINDING; COMPLEX; METHYLATION;
D O I
10.1371/journal.pone.0036365
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Polycomb group (PcG) proteins are key chromatin regulators implicated in multiple processes including embryonic development, tissue homeostasis, genomic imprinting, X-chromosome inactivation, and germ cell differentiation. The PcG proteins recognize target genomic loci through cis DNA sequences known as Polycomb Response Elements (PREs), which are well characterized in Drosophila. However, mammalian PREs have been elusive until two groups reported putative mammalian PREs recently. Consistent with the existence of mammalian PREs, here we report the identification and characterization of a potential PRE from human T cells. The putative human PRE has enriched binding of PcG proteins, and such binding is dependent on a key PcG component SUZ12. We demonstrate that the putative human PRE carries both genetic and molecular features of Drosophila PRE in transgenic flies, implying that not only the trans PcG proteins but also certain features of the cis PREs are conserved between mammals and Drosophila.
引用
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页数:10
相关论文
共 65 条
[1]   High-resolution profiling of histone methylations in the human genome [J].
Barski, Artern ;
Cuddapah, Suresh ;
Cui, Kairong ;
Roh, Tae-Young ;
Schones, Dustin E. ;
Wang, Zhibin ;
Wei, Gang ;
Chepelev, Iouri ;
Zhao, Keji .
CELL, 2007, 129 (04) :823-837
[2]   A bivalent chromatin structure marks key developmental genes in embryonic stem cells [J].
Bernstein, BE ;
Mikkelsen, TS ;
Xie, XH ;
Kamal, M ;
Huebert, DJ ;
Cuff, J ;
Fry, B ;
Meissner, A ;
Wernig, M ;
Plath, K ;
Jaenisch, R ;
Wagschal, A ;
Feil, R ;
Schreiber, SL ;
Lander, ES .
CELL, 2006, 125 (02) :315-326
[3]   Polycomb complexes repress developmental regulators in murine embryonic stem cells [J].
Boyer, LA ;
Plath, K ;
Zeitlinger, J ;
Brambrink, T ;
Medeiros, LA ;
Lee, TI ;
Levine, SS ;
Wernig, M ;
Tajonar, A ;
Ray, MK ;
Bell, GW ;
Otte, AP ;
Vidal, M ;
Gifford, DK ;
Young, RA ;
Jaenisch, R .
NATURE, 2006, 441 (7091) :349-353
[4]   Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions [J].
Bracken, AP ;
Dietrich, N ;
Pasini, D ;
Hansen, KH ;
Helin, K .
GENES & DEVELOPMENT, 2006, 20 (09) :1123-1136
[5]   ASH1, a Drosophila trithorax group protein, is required for methylation of lysine 4 residues on histone H3 [J].
Byrd, KN ;
Shearn, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (20) :11535-11540
[6]   The functions of E(Z)/EZH2-mediated methylation of lysine 27 in histone H3 [J].
Cao, R ;
Zhang, Y .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2004, 14 (02) :155-164
[7]   SUZ12 is required for both the histone methyltransferase activity and the silencing function of the EED-EZH2 complex [J].
Cao, R ;
Zhang, Y .
MOLECULAR CELL, 2004, 15 (01) :57-67
[8]   Role of histone H3 lysine 27 methylation in polycomb-group silencing [J].
Cao, R ;
Wang, LJ ;
Wang, HB ;
Xia, L ;
Erdjument-Bromage, H ;
Tempst, P ;
Jones, RS ;
Zhang, Y .
SCIENCE, 2002, 298 (5595) :1039-1043
[9]   A POLYCOMB RESPONSE ELEMENT IN THE UBX GENE THAT DETERMINES AN EPIGENETICALLY INHERITED STATE OF REPRESSION [J].
CHAN, CS ;
RASTELLI, L ;
PIRROTTA, V .
EMBO JOURNAL, 1994, 13 (11) :2553-2564
[10]   Tissue-specific TAFs counteract polycomb to turn on terminal differentiation [J].
Chen, X ;
Hiller, M ;
Sancak, Y ;
Fuller, MT .
SCIENCE, 2005, 310 (5749) :869-872