Shinella granuli gen nov, sp nov, and proposal of the reclassification of Zoogloea ramigera ATCC 19623 as Shinella zoogloeoides sp nov

被引:65
作者
An, DS [1 ]
Im, WT [1 ]
Yang, HC [1 ]
Lee, ST [1 ]
机构
[1] Korea Adv Inst Sci & Technol, Dept Biol Sci, Taejon 305701, South Korea
关键词
D O I
10.1099/ijs.0.63942-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The taxonomic position of a novel bacterial strain, Ch06(T), isolated from an upflow anaerobic sludge blanket reactor was determined. Strain Ch06T was Gram-negative, aerobic, motile and oxidase- and catalase-positive. A comparative 16S rRNA gene sequence analysis showed a clear affiliation of strain Ch06(T) to the Alphaproteobacteria and it was most closely related to Zoogloea ramigera ATCC 19623 and Mycoplana dimorpha IAM 13154(T) (97.9 and 96.3% sequence similarity, respectively). The major respiratory quinone was Q-10 and the predominant fatty acids were C-16:0, 3-OH C-16:0, C-18:0, C-19:0 cyclo omega 8c and summed feature 7 (C(18:1)omega 7c/omega 9t/omega 12t, C(18:1)omega 7c/omega 12t). On the basis of phenotypic, chemotaxonomic and phylogenetic characteristics, the novel isolate was assigned to a new genus, Shinella gen. nov., as Shinella granuli gen. nov., sp. nov. (type strain Ch06(T) =KCTC 12237(T) = JCM 13254(T)). It is proposed that Zoogloea ramigera ATCC 19623 is reclassified into the novel genus Shinella as Shinella zoogloeoides sp. nov. (type strain ATCC 19623(T) = IAM 12669(T) = I-16-M-T).
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页码:443 / 448
页数:6
相关论文
共 36 条
[1]  
[Anonymous], 1992, PROKARYOTES
[2]  
Atlas R. M., 1993, HDB MICROBIOLOGICAL
[3]   Lysobacter concretionis sp. nov., isolated from anaerobic granules in an upflow anaerobic sludge blanket reactor [J].
Bae, HS ;
Im, WT ;
Lee, ST .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 :1155-1161
[4]  
CRABTREE K., 1967, INT J SYST BACTERIOL, V17, P1
[5]   POLYPHASIC TAXONOMY OF RHIZOBIA - EMENDATION OF THE GENUS SINORHIZOBIUM AND DESCRIPTION OF SINORHIZOBIUM-MELILOTI COMB-NOV, SINORHIZOBIUM-SAHELI SP-NOV, AND SINORHIZOBIUM-TERANGA SP-NOV [J].
DELAJUDIE, P ;
WILLEMS, A ;
POT, B ;
DEWETTINCK, D ;
MAESTROJUAN, G ;
NEYRA, M ;
COLLINS, MD ;
DREYFUS, B ;
KERSTERS, K ;
GILLIS, M .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1994, 44 (04) :715-733
[6]   FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS [J].
EZAKI, T ;
HASHIMOTO, Y ;
YABUUCHI, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03) :224-229
[7]  
FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
[8]   TOWARD DEFINING COURSE OF EVOLUTION - MINIMUM CHANGE FOR A SPECIFIC TREE TOPOLOGY [J].
FITCH, WM .
SYSTEMATIC ZOOLOGY, 1971, 20 (04) :406-&
[9]  
Hall T.A., 1999, NUCL ACIDS S SER, V41, P95, DOI DOI 10.1021/BK-1999-0734.CH008
[10]   Proposal to reclassify Zoogloea ramigera IAM 12670 (P. R. Dugan 115) as Duganella zoogloeoides gen. nov., sp. nov. [J].
Hiraishi, A ;
Shin, YK ;
Sugiyama, J .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1997, 47 (04) :1249-1252