Crystallization and preliminary X-ray diffraction analysis of two pH-dependent forms of a di-haem cytochrome c peroxidase from Pseudomonas nautica

被引:5
作者
Dias, JM [1 ]
Bonifácio, C [1 ]
Alves, T [1 ]
Moura, JJG [1 ]
Moura, I [1 ]
Romao, MJ [1 ]
机构
[1] Univ Nova Lisboa, Fac Ciencias & Tecnol, Ctr Quim Fina & Biotecnol, Dept Quim, P-2829516 Monte De Caparica, Portugal
来源
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY | 2002年 / 58卷
关键词
D O I
10.1107/S0907444902002354
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Two crystal forms of cytochrome c peroxidase from Pseudomonas nautica were obtained, one at pH 4.0 using sodium citrate as precipitant and another at pH 5.3 using ammonium phosphate and sodium citrate as precipitants. The two forms belong to different space groups P3(1)21 (pH 4.0) and P6(4)22 (pH 5.3), with unit-cell parameters a = b = 114.5, c = 90.7 Angstrom and a = b = 151.0, c = 155.9 Angstrom, respectively. Several complete data sets were collected using synchrotron radiation at ESRF and Cu Kalpha X-ray radiation from a rotating-anode generator. These results will contribute to clarifying the haem transitions occurring during peroxidatic reaction and the required electron-transfer processes and to elucidating the catalytic mechanism of the enzyme and the role of calcium in the activation process.
引用
收藏
页码:697 / 699
页数:3
相关论文
共 20 条
[11]   SPECTROSCOPIC CHARACTERIZATION OF CYTOCHROME-C PEROXIDASE FROM PARACOCCUS-DENITRIFICANS [J].
GILMOUR, R ;
GOODHEW, CF ;
PETTIGREW, GW ;
PRAZERES, S ;
MOURA, I ;
MOURA, JJG .
BIOCHEMICAL JOURNAL, 1993, 294 :745-752
[12]   THE CELLULAR LOCATION AND SPECIFICITY OF BACTERIAL CYTOCHROME-C PEROXIDASES [J].
GOODHEW, CF ;
WILSON, IBH ;
HUNTER, DJB ;
PETTIGREW, GW .
BIOCHEMICAL JOURNAL, 1990, 271 (03) :707-712
[13]   OXYGEN-TOXICITY, OXYGEN RADICALS, TRANSITION-METALS AND DISEASE [J].
HALLIWELL, B ;
GUTTERIDGE, JMC .
BIOCHEMICAL JOURNAL, 1984, 219 (01) :1-14
[14]   SPARSE-MATRIX SAMPLING - A SCREENING METHOD FOR CRYSTALLIZATION OF PROTEINS [J].
JANCARIK, J ;
KIM, SH .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1991, 24 :409-411
[15]   Rapid automated molecular replacement by evolutionary search [J].
Kissinger, CR ;
Gehlhaar, DK ;
Fogel, DB .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1999, 55 :484-491
[16]   Electrochemical study on cytochrome c peroxidase from Paracoccus denitrificans:: a shifting pattern of structural and thermodynamic properties as the enzyme is activated [J].
Lopes, H ;
Pettigrew, GW ;
Moura, I ;
Moura, JJG .
JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, 1998, 3 (06) :632-642
[17]   SOLVENT CONTENT OF PROTEIN CRYSTALS [J].
MATTHEWS, BW .
JOURNAL OF MOLECULAR BIOLOGY, 1968, 33 (02) :491-+
[18]   Processing of X-ray diffraction data collected in oscillation mode [J].
Otwinowski, Z ;
Minor, W .
MACROMOLECULAR CRYSTALLOGRAPHY, PT A, 1997, 276 :307-326
[19]   THE CYTOCHROME-C PEROXIDASE OF PARACOCCUS-DENITRIFICANS [J].
PETTIGREW, GW .
BIOCHIMICA ET BIOPHYSICA ACTA, 1991, 1058 (01) :25-27
[20]   Crystal structure of Nitrosomonas europaea cytochrome c peroxidase and the structural basis for ligand switching in bacterial Di-heme peroxidases [J].
Shimizu, H ;
Schuller, DJ ;
Lanzilotta, WN ;
Sundaramoorthy, M ;
Arciero, DM ;
Hooper, AB ;
Poulos, TL .
BIOCHEMISTRY, 2001, 40 (45) :13483-13490