Next-Generation Sequencing-the Promise and Perils of Charting the Great Microbial Unknown

被引:21
作者
Snyder, Lori A. S. [1 ]
Loman, Nick [1 ]
Pallen, Mark J. [1 ]
Penn, Charles W. [2 ]
机构
[1] Univ Birmingham, Ctr Syst Biol, Birmingham B15 2TT, W Midlands, England
[2] Univ Birmingham, Sch Biosci, Birmingham B15 2TT, W Midlands, England
关键词
GUT MICROBIOME; BIG DATA; BIOSPHERE; DIVERSITY; EVOLUTION; SEA;
D O I
10.1007/s00248-008-9465-9
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
引用
收藏
页码:1 / 3
页数:3
相关论文
共 17 条
[1]   A metagenomic survey of microbes in honey bee colony collapse disorder [J].
Cox-Foster, Diana L. ;
Conlan, Sean ;
Holmes, Edward C. ;
Palacios, Gustavo ;
Evans, Jay D. ;
Moran, Nancy A. ;
Quan, Phenix-Lan ;
Briese, Thomas ;
Hornig, Mady ;
Geiser, David M. ;
Martinson, Vince ;
vanEngelsdorp, Dennis ;
Kalkstein, Abby L. ;
Drysdale, Andrew ;
Hui, Jeffrey ;
Zhai, Junhui ;
Cui, Liwang ;
Hutchison, Stephen K. ;
Simons, Jan Fredrik ;
Egholm, Michael ;
Pettis, Jeffery S. ;
Lipkin, W. Ian .
SCIENCE, 2007, 318 (5848) :283-287
[2]   Big data: Welcome to the petacentre [J].
Doctorow, Cory .
NATURE, 2008, 455 (7209) :16-21
[3]   Diversity of the human intestinal microbial flora [J].
Eckburg, PB ;
Bik, EM ;
Bernstein, CN ;
Purdom, E ;
Dethlefsen, L ;
Sargent, M ;
Gill, SR ;
Nelson, KE ;
Relman, DA .
SCIENCE, 2005, 308 (5728) :1635-1638
[4]   Using pyrosequencing to shed light on deep mine microbial ecology [J].
Edwards, Robert A. ;
Rodriguez-Brito, Beltran ;
Wegley, Linda ;
Haynes, Matthew ;
Breitbart, Mya ;
Peterson, Dean M. ;
Saar, Martin O. ;
Alexander, Scott ;
Alexander, E. Calvin, Jr. ;
Rohwer, Forest .
BMC GENOMICS, 2006, 7 (1)
[5]   Metagenomic analysis of the human distal gut microbiome [J].
Gill, Steven R. ;
Pop, Mihai ;
DeBoy, Robert T. ;
Eckburg, Paul B. ;
Turnbaugh, Peter J. ;
Samuel, Buck S. ;
Gordon, Jeffrey I. ;
Relman, David A. ;
Fraser-Liggett, Claire M. ;
Nelson, Karen E. .
SCIENCE, 2006, 312 (5778) :1355-1359
[6]   Microbial population structures in the deep marine biosphere [J].
Huber, Julie A. ;
Mark Welch, David ;
Morrison, Hilary G. ;
Huse, Susan M. ;
Neal, Phillip R. ;
Butterfield, David A. ;
Sogin, Mitchell L. .
SCIENCE, 2007, 318 (5847) :97-100
[7]   Archaea predominate among ammonia-oxidizing prokaryotes in soils [J].
Leininger, S. ;
Urich, T. ;
Schloter, M. ;
Schwark, L. ;
Qi, J. ;
Nicol, G. W. ;
Prosser, J. I. ;
Schuster, S. C. ;
Schleper, C. .
NATURE, 2006, 442 (7104) :806-809
[8]   Evolution of mammals and their gut microbes [J].
Ley, Ruth E. ;
Hamady, Micah ;
Lozupone, Catherine ;
Turnbaugh, Peter J. ;
Ramey, Rob Roy ;
Bircher, J. Stephen ;
Schlegel, Michael L. ;
Tucker, Tammy A. ;
Schrenzel, Mark D. ;
Knight, Rob ;
Gordon, Jeffrey I. .
SCIENCE, 2008, 320 (5883) :1647-1651
[9]   Microbiology: The inside story [J].
Mullard, Asher .
NATURE, 2008, 453 (7195) :578-580
[10]   ANALYSIS OF A MARINE PICOPLANKTON COMMUNITY BY 16S RIBOSOMAL-RNA GENE CLONING AND SEQUENCING [J].
SCHMIDT, TM ;
DELONG, EF ;
PACE, NR .
JOURNAL OF BACTERIOLOGY, 1991, 173 (14) :4371-4378